Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03194 and BPUM_1880
See
DNA alignment /
Visit
BSNT_03194 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence pep-align/BSNT_03194___ctpA.1.24716.seq
# -bsequence pep-align/BPUM_1880___ctpA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03194___ctpA-BPUM_1880___ctpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03194___ctpA-BPUM_1880___ctpA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03194___ctpA
# 2: BPUM_1880___ctpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 467
# Identity: 314/467 (67.2%)
# Similarity: 376/467 (80.5%)
# Gaps: 7/467 ( 1.5%)
# Score: 1608.0
#
#
#=======================================
BSNT_03194___ 1 MKRQLKLFFIVLITAVVASALTLFITGNSSILGQKSTSTGDSKFDKLNKA 50
||:|.|....:|:||.::|.:|..||...:: ..:||.||.||..|
BPUM_1880___c 1 MKKQFKFVIAILLTAALSSVITFVITKQGAV-----NVSGDEKFSKLMAA 45
BSNT_03194___ 51 YEQIKSDYYQKTDDDKLVDGAIKGMIQSLDDPYSTYMDQEQAKSFDETIS 100
|.::|.:||:||||.|||||||:|||.|||||||||||||:|:.|:.|||
BPUM_1880___c 46 YTKVKDEYYEKTDDQKLVDGAIQGMIASLDDPYSTYMDQEEAEGFNNTIS 95
BSNT_03194___ 101 ASFEGIGAQVEEKDGEILIVSPIKGSPAEKAGIKPRDQIIKVNGKSVKGM 150
:||||||||||||||:||||:|||||||||||:||.|:|:||:|||.|||
BPUM_1880___c 96 SSFEGIGAQVEEKDGQILIVAPIKGSPAEKAGLKPHDRILKVDGKSTKGM 145
BSNT_03194___ 151 NVNEAVALIRGKKGTKVKLELNRAGVGNIDLSIKRDTIPVETVYSEMKDN 200
:||:||:||||||||.|||.|||.||||:|::|.||||||||||:::..:
BPUM_1880___c 146 SVNQAVSLIRGKKGTDVKLHLNRQGVGNVDVTITRDTIPVETVYAKLTKD 195
BSNT_03194___ 201 NIGEIQITSFSETTAKELTDAIDGLEKKGAKGYILDLRGNPGGLMEQAIT 250
.|||||||||:|||:|||..|||.||||||||:::|||.||||:|.:||.
BPUM_1880___c 196 KIGEIQITSFAETTSKELDKAIDDLEKKGAKGFVIDLRDNPGGIMTEAIE 245
BSNT_03194___ 251 MSNLFIDKGKNIMQVEYKNGSKEVMKAEKERKVTKPTVVLVNDGTASAAE 300
|||.||||||.|||||.| |.||..||||||||.:|.|||||.|:|||||
BPUM_1880___c 246 MSNDFIDKGKVIMQVEEK-GKKEEYKAEKERKVHQPAVVLVNGGSASAAE 294
BSNT_03194___ 301 IMAAALHESSNVPLIGETTFGKGTVQTAKEYDDGSTVKLTVAKWLTADGE 350
|||||||:||.:.:|||.||||||||.|:.|:|||:||||:|||||.||.
BPUM_1880___c 295 IMAAALHQSSGIKIIGEKTFGKGTVQNAQSYNDGSSVKLTIAKWLTPDGS 344
BSNT_03194___ 351 WIHKKGIKPQVKAELPDYAKLPYLDADKTYKSGDTGTNVKVAQKMLKALG 400
|||||||:|||||.||.|||||||...|||:..|:|..||.||||.:||.
BPUM_1880___c 345 WIHKKGIEPQVKASLPSYAKLPYLSPKKTYQLNDSGDEVKAAQKMFQALD 394
BSNT_03194___ 401 YKVNVNSTYDQDFVSVVKQFQKKEELKETGILTGDTTTKLMIELQKKLSD 450
||...|..|||.|.::||:||...:||..|||||||||.||.::|.||.:
BPUM_1880___c 395 YKAKANGEYDQAFQAIVKKFQTDNDLKADGILTGDTTTVLMTKIQDKLKN 444
BSNT_03194___ 451 NDTQMEKAIETLKKEM- 466
|||||:||||.|||||
BPUM_1880___c 445 NDTQMKKAIEVLKKEMK 461
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.