Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03190 and BPUM_1877

See DNA alignment / Visit BSNT_03190 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence pep-align/BSNT_03190.1.24716.seq
#    -bsequence pep-align/BPUM_1877.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03190-BPUM_1877.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03190-BPUM_1877.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03190
# 2: BPUM_1877
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 67
# Identity:      41/67 (61.2%)
# Similarity:    53/67 (79.1%)
# Gaps:           1/67 ( 1.5%)
# Score: 232.0
# 
#
#=======================================

BSNT_03190         1 MVKKALIVILILLPFV-QLALLPLVNRIEPIMFGLPFFHFWLLLWIIVTP     49
                     |.||.::.:||.:||: ||||||..|||.|.:.|||||||||||||::||
BPUM_1877          1 MNKKLILALLIAIPFIGQLALLPFANRIHPFVIGLPFFHFWLLLWIVLTP     50

BSNT_03190        50 LCSFGIYQMQKKDGGLE     66
                     :|:|.|||||..:||.:
BPUM_1877         51 VCTFIIYQMQHSNGGTD     67


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.