Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03190 and BPUM_1877
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence dna-align/BSNT_03190.1.24716.seq
# -bsequence dna-align/BPUM_1877.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03190-BPUM_1877.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03190-BPUM_1877.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03190
# 2: BPUM_1877
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 214
# Identity: 142/214 (66.4%)
# Similarity: 142/214 (66.4%)
# Gaps: 23/214 (10.7%)
# Score: 455.0
#
#
#=======================================
BSNT_03190 1 ATGGTTAAAAAA---------GC---ACTTATTGTTATTCTCATTCTTTT 38
|||..||||||| || ||||||.|..|||| ||||
BPUM_1877 1 ATGAATAAAAAATTGATACTGGCACTACTTATAGCGATTC-CATT----- 44
BSNT_03190 39 GCCAT-TCGTTCAGCTCGCGCTTTTGCCGCTTGTGAATCGAATAGAACCG 87
| |||..||||||||.||..|.||..|||.||||||.||..|.||.
BPUM_1877 45 ----TATCGGACAGCTCGCACTGCTACCCTTTGCGAATCGTATTCATCCA 90
BSNT_03190 88 ATTATGTTCGGCCTGCCGTTTTTCCACTTTTGGCTGCTGCTGTGGATTAT 137
.||.||.||||||||||.||||||||.||.|||||..|.||.||||||.|
BPUM_1877 91 TTTGTGATCGGCCTGCCTTTTTTCCATTTCTGGCTCTTACTATGGATTGT 140
BSNT_03190 138 TGTTACGCCGTTATGCTCGTTTGGCATTTATCAGATGCAAAAAAAAGATG 187
|.|.||.||..|.||..|.|||..||||||||||||||||.|...|.|||
BPUM_1877 141 TCTCACACCAGTCTGTACATTTATCATTTATCAGATGCAACATTCAAATG 190
BSNT_03190 188 GAGGACTTGAATAA 201
|||||..|||.|||
BPUM_1877 191 GAGGAACTGACTAA 204
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