Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03182 and BPUM_1876
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence pep-align/BSNT_03182___yodC.1.24716.seq
# -bsequence pep-align/BPUM_1876.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03182___yodC-BPUM_1876.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03182___yodC-BPUM_1876.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03182___yodC
# 2: BPUM_1876
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 142/205 (69.3%)
# Similarity: 176/205 (85.9%)
# Gaps: 3/205 ( 1.5%)
# Score: 759.0
#
#
#=======================================
BSNT_03182___ 1 ---MTNTLDVLKARASVKEYDTNAPISKEELTELLDFAAKAPSAWNLQHW 47
...|:|:||.|||||||||...::|||||||||...|||||||||||
BPUM_1876 1 MATDQKTIDILKQRASVKEYDTTHEMTKEELTELLDITTKAPSAWNLQHW 50
BSNT_03182___ 48 HFTVFHSDESKAELLPVAYNQKQIVESSAVVAILGDLKANENGEEVYAEL 97
|||||||.||||:|||:|||||||.::|||:|:||||:||:|||::|:||
BPUM_1876 51 HFTVFHSAESKAKLLPIAYNQKQISQASAVIAVLGDLEANQNGEKIYSEL 100
BSNT_03182___ 98 ASQGYITDEIKQTLLGQINGAYQSEQFARDSAFLNASLAAMQLMIAAKAK 147
|.||:||::||:||:.||||||||||:||::|:.|||||||||||||||.
BPUM_1876 101 AEQGFITEDIKETLMTQINGAYQSEQYAREAAYSNASLAAMQLMIAAKAM 150
BSNT_03182___ 148 GYDTCAIGGFNKEQFQKQFDISERYVPVMLISIGKAVKPAHQSNRLPLSK 197
||||||:|||:||.|.|:|::|.||.||||||:|||.|.||:|||..:.:
BPUM_1876 151 GYDTCAMGGFSKEAFIKEFNVSGRYEPVMLISVGKAAKEAHKSNRFDIEE 200
BSNT_03182___ 198 VSTWL 202
||.:|
BPUM_1876 201 VSDFL 205
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