Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03181 and BPUM_1875

See DNA alignment / Visit BSNT_03181 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence pep-align/BSNT_03181___yodB.1.24716.seq
#    -bsequence pep-align/BPUM_1875___yodB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03181___yodB-BPUM_1875___yodB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03181___yodB-BPUM_1875___yodB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03181___yodB
# 2: BPUM_1875___yodB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 115
# Identity:      71/115 (61.7%)
# Similarity:    85/115 (73.9%)
# Gaps:           8/115 ( 7.0%)
# Score: 362.0
# 
#
#=======================================

BSNT_03181___      1 MGNTMCPKMESAFSLLGKRWNGLIIHVLMDGPKRFKEITETIPMISQKML     50
                     |...:||.::.||.||||||||||||||:|||||||::|:.||.||||||
BPUM_1875___y      1 MEFQLCPHIQQAFLLLGKRWNGLIIHVLLDGPKRFKDMTDIIPSISQKML     50

BSNT_03181___     51 AERLKELEQNEIVERQVLPETPVKVIYTLTEKGTALQAVFQEMQAWADQF    100
                     ||||||||:..|::|.|||||||||||.|||||.||..||.|:..||.::
BPUM_1875___y     51 AERLKELEEEGIIKRTVLPETPVKVIYCLTEKGNALHDVFHEVSRWAGEY    100

BSNT_03181___    101 CEPGDTVCEEEK---    112
                          |...|:|   
BPUM_1875___y    101 -----TASHEKKEQA    110


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