Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03173 and BPUM_1873

See DNA alignment / Visit BSNT_03173 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence pep-align/BSNT_03173___yozR.1.24716.seq
#    -bsequence pep-align/BPUM_1873___yozR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03173___yozR-BPUM_1873___yozR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03173___yozR-BPUM_1873___yozR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03173___yozR
# 2: BPUM_1873___yozR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:      86/157 (54.8%)
# Similarity:   118/157 (75.2%)
# Gaps:           0/157 ( 0.0%)
# Score: 470.0
# 
#
#=======================================

BSNT_03173___      1 MFEWNKYFPFHNQFSKEALKKADPKEVETYVNRVMESVFGSDYAAQFPFR     50
                     ||:||:.|||..||||||||.:|||:||.|||:||||||||:|.|||||:
BPUM_1873___y      1 MFDWNRLFPFQKQFSKEALKNSDPKDVEQYVNQVMESVFGSNYPAQFPFQ     50

BSNT_03173___     51 DPLPQKEHPAKPDAKPDVKPDIDIFETADHVFVKVPISEEWLEQVRIKHT    100
                     |||.|.:...:.|.|.:.:|::::|||.||||||:.::....|:|:||||
BPUM_1873___y     51 DPLSQHQKTKETDVKKEKEPEVEVFETTDHVFVKLELARPNTEKVKIKHT    100

BSNT_03173___    101 SHELWLENLPRADHPKKVNLPCLVKRKGTKAVYKDGLLEVMFQKQQDYNM    150
                     ::.|::::.|.....|||.||..||||||||.|:||:||:||.|..|..:
BPUM_1873___y    101 ANLLFIDHFPEEGTQKKVVLPAAVKRKGTKASYQDGILEIMFLKHDDPGI    150

BSNT_03173___    151 SEVEIIR    157
                     ||::|..
BPUM_1873___y    151 SEIDIPL    157


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