Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03172 and BPUM_1872

See DNA alignment / Visit BSNT_03172 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence pep-align/BSNT_03172___yojE.1.24716.seq
#    -bsequence pep-align/BPUM_1872___rarD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03172___yojE-BPUM_1872___rarD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03172___yojE-BPUM_1872___rarD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03172___yojE
# 2: BPUM_1872___rarD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 301
# Identity:     191/301 (63.5%)
# Similarity:   234/301 (77.7%)
# Gaps:           3/301 ( 1.0%)
# Score: 980.5
# 
#
#=======================================

BSNT_03172___      1 MQYSETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFM     50
                     |...:..|||:|||.||.:||||||||||:|.:.:.:||||||:||||||
BPUM_1872___r      1 MNEQQQSKGVLYTAASFTLWGLFPLYWKLMEHISSGEILAHRILWSFVFM     50

BSNT_03172___     51 CIVLFFLRQWKIGWQELRSLKKNG-GILSLFLASILISINWFVYIWAVNH     99
                     |.:|.:|:|.:...|.::.|..:| .:.||.|::||||:||:||||||||
BPUM_1872___r     51 CGILLYLKQVRPAMQTVKGLMLDGKALFSLLLSAILISVNWYVYIWAVNH    100

BSNT_03172___    100 GFLLEASLGYYINPLVSVLLGILFLKEKLNRLQLVAVSIAAAGVIISAFQ    149
                     ..:|||||||||||||||||||:||||:||:||.:|:.|||||||:|..|
BPUM_1872___r    101 HLMLEASLGYYINPLVSVLLGIIFLKERLNKLQTIAILIAAAGVILSTIQ    150

BSNT_03172___    150 YGSIPYVALLLAFSFGLYGLSKKRTSLPSAIGLTLETFMIMPIALGYLLF    199
                     |||.|.||:|||||||.|||.|||.|..||||||:||.::.|.||.||||
BPUM_1872___r    151 YGSFPVVAILLAFSFGFYGLIKKRMSFTSAIGLTIETLLLAPAALVYLLF    200

BSNT_03172___    200 --SGHVQPAGAESGGTWLLLFLAGVFTALPLLLFAEGAKRLPLYQVGILQ    247
                       ...|......|.|:..|||.||||||:|||||:|||||:|||||||||
BPUM_1872___r    201 FLKEPVVTMNPNSFGSLGLLFFAGVFTAVPLLLFSEGAKRIPLYQVGILQ    250

BSNT_03172___    248 YIAPTITLLIGLFVYHEPFSSSKAFTFSCIWAALILFTFSQVKWKRASKS    297
                     ||||||||.:|||||||..||:|..||.|||.|::|||.||::.|:.:.|
BPUM_1872___r    251 YIAPTITLFLGLFVYHEHLSSAKIVTFLCIWVAILLFTTSQLRMKKTANS    300

BSNT_03172___    298 H    298
                     |
BPUM_1872___r    301 H    301


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