Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03169 and BPUM_1871

See DNA alignment / Visit BSNT_03169 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence pep-align/BSNT_03169.1.24716.seq
#    -bsequence pep-align/BPUM_1871.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03169-BPUM_1871.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03169-BPUM_1871.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03169
# 2: BPUM_1871
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 93
# Identity:      37/93 (39.8%)
# Similarity:    52/93 (55.9%)
# Gaps:           1/93 ( 1.1%)
# Score: 170.0
# 
#
#=======================================

BSNT_03169         1 MDNDKEIVKAYASLWNNRSLAHDDAEAVAEAIDLELLDKRTHPRLRKPML     50
                     |.:..|:..||.|||.||.|..|:..::.|||..:|.|.|||||.||...
BPUM_1871          1 MSSANELTAAYQSLWKNRQLDVDNMTSLLEAICDDLSDARTHPRARKSFH     50

BSNT_03169        51 EKYFAAIQRIVNSQLEPAVKYQLVKLHTERAEYLKEERGEQS-     92
                     :||..|::||:.|.|....:.||:.|||::...|.:..|... 
BPUM_1871         51 QKYVLAVERILESGLGHDHQLQLISLHTKKLRELIQNEGRNHS     93


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