Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03168 and BPUM_1870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence pep-align/BSNT_03168___yojF.1.24716.seq
# -bsequence pep-align/BPUM_1870.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03168___yojF-BPUM_1870.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03168___yojF-BPUM_1870.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03168___yojF
# 2: BPUM_1870
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity: 88/116 (75.9%)
# Similarity: 100/116 (86.2%)
# Gaps: 0/116 ( 0.0%)
# Score: 465.0
#
#
#=======================================
BSNT_03168___ 1 MKAIIKEDVQASLERYADRPVYIHLETTTGSYSAHLNEKNMTVVAYIRNA 50
||.|..|||.|.||.:.:|||::||||||||||||:||:|||||||||||
BPUM_1870 1 MKPIQTEDVTAHLESFLNRPVFVHLETTTGSYSAHVNEQNMTVVAYIRNA 50
BSNT_03168___ 51 KVTYHQAKIKGNGPYRVGLKTEEGWIYAEGLTEYTVDEENRLLMAGHLPG 100
||.|.||||||.||||||:|||:|||||||||:|..|::.|||:|||||.
BPUM_1870 51 KVVYSQAKIKGQGPYRVGMKTEDGWIYAEGLTDYEFDDQGRLLLAGHLPD 100
BSNT_03168___ 101 GKLAISLQISEKPFTV 116
|||||||||||.||.|
BPUM_1870 101 GKLAISLQISETPFQV 116
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