Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03163 and BPUM_1868
See
DNA alignment /
Visit
BSNT_03163 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence pep-align/BSNT_03163___yojI.1.24716.seq
# -bsequence pep-align/BPUM_1868.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03163___yojI-BPUM_1868.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03163___yojI-BPUM_1868.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03163___yojI
# 2: BPUM_1868
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity: 320/454 (70.5%)
# Similarity: 370/454 (81.5%)
# Gaps: 3/454 ( 0.7%)
# Score: 1598.5
#
#
#=======================================
BSNT_03163___ 1 MKETQNAREKIKQLLHILIPIFITQAGLSLITFLDTVMSGKVSPADLAGV 50
|:||.:.|.|:...|.:||||.|||||||||||||||||||||..|||||
BPUM_1868 1 MRETNSIRAKVTLFLTMLIPILITQAGLSLITFLDTVMSGKVSAEDLAGV 50
BSNT_03163___ 51 AIGSSLWTPVYTGLAGILMAVTPIVAQLLGAEKKQKIPFTVLQAVYVAAL 100
|||||:||||||||||||||||||||||:||..|:.:|..|.||:|::.|
BPUM_1868 51 AIGSSIWTPVYTGLAGILMAVTPIVAQLMGAGHKKDVPKAVFQAIYLSLL 100
BSNT_03163___ 101 LSIAVLVIGYAAVDLILGRLNLDIHVHQIAKHFLGFLSLGIFPLFVYTVL 150
|||.|:.||...:..:|..|.|:..|..||.|||.||:.||.|||.|:||
BPUM_1868 101 LSICVITIGTIGIPYVLEGLGLEQSVEDIAHHFLSFLAFGIIPLFGYSVL 150
BSNT_03163___ 151 RSFIDSLGKTRVTMMITLSSLPINFVLNYVFIFGKFGMPALGGVGAGLAS 200
|||||:||||||||.|||::||||||||||||||.||.|.|||.||||||
BPUM_1868 151 RSFIDALGKTRVTMFITLTALPINFVLNYVFIFGNFGFPKLGGAGAGLAS 200
BSNT_03163___ 201 ALTYWCICIISFFIIHKNAPFSEYGIFLTMYKFSWKACKNLLKIGLPIGF 250
|:|||.|.|:|..|:.|..||:.:.:|..:.:.:......:|||||||||
BPUM_1868 201 AMTYWAIFIMSICIVMKAEPFASFHLFQKLPRINISRMGQILKIGLPIGF 250
BSNT_03163___ 251 AVFFETSIFAAVTLLMSHFHTVTIASHQAAMNFASLLYMLPLSVSMALTI 300
|:||||||||||||||.||.|||||||||||||||:||:||||:||||||
BPUM_1868 251 AIFFETSIFAAVTLLMGHFDTVTIASHQAAMNFASILYILPLSISMALTI 300
BSNT_03163___ 301 VVGFEAGAARFKDARSYSLIGIMMAIGFSLFTAACILLFREQIAGMYTSD 350
||||||||.|:|||:|||.|||..|:.|||||||.|||||.:|||:||::
BPUM_1868 301 VVGFEAGAKRYKDAQSYSYIGIGTAVLFSLFTAALILLFRPEIAGLYTAE 350
BSNT_03163___ 351 PDVLRLTQHFLIYALFFQLSDAVAAPIQGALRGYKDVNYTLAAAFVSYWV 400
..||:|||||||||:|||||||:||||||||||||||||||.||||||||
BPUM_1868 351 SAVLQLTQHFLIYAIFFQLSDAIAAPIQGALRGYKDVNYTLIAAFVSYWV 400
BSNT_03163___ 401 IGLPVGYMVGTFTSLGAFGYWIGLIAGLAAGAVGLFFRLAKLQKRYSQK- 449
||||.||::||:||.||||||||||||||||||.||.||..::||..|:
BPUM_1868 401 IGLPSGYLIGTYTSYGAFGYWIGLIAGLAAGAVVLFIRLRLMEKRLLQQA 450
BSNT_03163___ 450 -QHI 452
.|
BPUM_1868 451 PSH- 453
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.