Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03162 and BPUM_1867
See
DNA alignment /
Visit
BSNT_03162 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence pep-align/BSNT_03162___yojJ.1.24716.seq
# -bsequence pep-align/BPUM_1867.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03162___yojJ-BPUM_1867.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03162___yojJ-BPUM_1867.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03162___yojJ
# 2: BPUM_1867
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity: 98/244 (40.2%)
# Similarity: 127/244 (52.0%)
# Gaps: 80/244 (32.8%)
# Score: 447.0
#
#
#=======================================
BSNT_03162___ 1 MRYEQISENAFKGKIQVYLEQILGDASLILKTLHEKDQCLLCELDDLGHV 50
|......|..||..::.:|.:|:.|||.|:.:|.|.:|||||:|:.|...
BPUM_1867 1 MINRTNEEAQFKVGMRTHLMKIMKDASDIIDSLDEIEQCLLCDLESLHDE 50
BSNT_03162___ 51 FQDMQGIASSFYLQSYIEEFTPAFIELAKAIKALSEHKHGALIVIERADP 100
|.:|...|||||||||:||:||.|.:.:.||:.||:.||||||||:|.|.
BPUM_1867 51 FNEMHAEASSFYLQSYMEEYTPGFAQFSLAIENLSKQKHGALIVIQRRDE 100
BSNT_03162___ 101 VERFIQKGTSLHAEISSSLIESIFFPGNPLHDGALLVRENKLVSAANVLP 150
||.|||:||:|||:||:|||||||:||||||||||||:||.|||||||||
BPUM_1867 101 VEDFIQRGTNLHAKISASLIESIFYPGNPLHDGALLVKENTLVSAANVLP 150
BSNT_03162___ 151 LTTKEVDIHLGTRHRAALGMSGYTDALVLVVSEETGKMSFAKDGVLYPLI 200
||:|: ..||::|
BPUM_1867 151 LTSKK-------------------------------SQSFSRD------- 162
BSNT_03162___ 201 SPRT---------------------------------------- 204
:|
BPUM_1867 163 --KTQSCDWTLWHDRCTCSRRFRGNRENVICERRRPLSAHCKRA 204
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.