Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03157 and BPUM_1865
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence pep-align/BSNT_03157___yojM.1.24716.seq
# -bsequence pep-align/BPUM_1865___yojM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03157___yojM-BPUM_1865___yojM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03157___yojM-BPUM_1865___yojM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03157___yojM
# 2: BPUM_1865___yojM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 214
# Identity: 92/214 (43.0%)
# Similarity: 128/214 (59.8%)
# Gaps: 26/214 (12.1%)
# Score: 490.0
#
#
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BSNT_03157___ 1 ---------------MHRLLLLMMLTALGVAGCGQKKPPDPPNRVPEKKV 35
...:.|:||........|.. ||.:...::.
BPUM_1865___y 1 MIRLSILISKGGNHMKKSVWLIMMCLVFVTTACHA-----PPKKETTEET 45
BSNT_03157___ 36 VETSAFGH---HVQLVNREGKAVGFIEIKESDDEGLDIHISANSLRPGAS 82
:|.:|... ...|:|..|:.:|.||:::|.:.|||:|:.|.:|.||..
BPUM_1865___y 46 IEVAAPKQAPVTTPLINESGQKIGSIEVRDSSENGLDLHVKAKNLPPGPH 95
BSNT_03157___ 83 LGFHIYEKGSCVRPDFESAGGPFNPLNKEHGFNNPMGHHAGDLPNLEVGA 132
||||:|.|.|..||||:||..|||.::||||:||.||||||:|||||||
BPUM_1865___y 96 -GFHIHETGRCETPDFETAGAHFNPTHREHGFDNPKGHHAGDMPNLEVGA 144
BSNT_03157___ 133 DGKVDVIMNAPDTSLKKGSKLNILDEDGSAFIIHEQADDYLTNPSGNSGA 182
||::||::|.||.:||.|.. .::|::|.:||||.:|||||:|||||||.
BPUM_1865___y 145 DGQIDVVVNVPDVTLKGGMN-QLIDQNGRSFIIHAEADDYLSNPSGNSGK 193
BSNT_03157___ 183 RIVCGALLGNNEKQ 196
||.|||:.....|
BPUM_1865___y 194 RIACGAITKEMVK- 206
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