Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03154 and BPUM_1863
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence pep-align/BSNT_03154___yojO.1.24716.seq
# -bsequence pep-align/BPUM_1863___yojO.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03154___yojO-BPUM_1863___yojO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03154___yojO-BPUM_1863___yojO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03154___yojO
# 2: BPUM_1863___yojO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 640
# Identity: 480/640 (75.0%)
# Similarity: 541/640 (84.5%)
# Gaps: 4/640 ( 0.6%)
# Score: 2478.0
#
#
#=======================================
BSNT_03154___ 1 MKFIKFNDSTIDSFLFMMLTDLAKTLTKSEAVEVEYGVQSYYNPFEKKIY 50
|||||||||.|||||||.||||||||.||:.||:||||||||:||||||:
BPUM_1863___y 1 MKFIKFNDSRIDSFLFMELTDLAKTLAKSDDVELEYGVQSYYDPFEKKIF 50
BSNT_03154___ 51 MSHFWKDRAAEDMEAGLKSDVYLRSVGTRYSSLHEFANFLNDIHRHLTFK 100
:||||.||..|||.|||||||:||:|||.||.|..|...:...|. ::..
BPUM_1863___y 51 ISHFWDDRKQEDMTAGLKSDVFLRAVGTVYSDLSVFQEIIRYAHT-ISIP 99
BSNT_03154___ 101 SFAKQLFMLLEDIRIEECIKRERPGTKHVFAKRKDMYRKHFSTQLTLNLE 150
...||||||.|||||||.|||||||||.||.:|:::||:||.||||:|.|
BPUM_1863___y 100 DLCKQLFMLFEDIRIEERIKRERPGTKKVFKRRRELYRRHFKTQLTINQE 149
BSNT_03154___ 151 RSIFTDALFCAIYVKLTAESPLETLPSMREDIDLMRPFIEQQLLRVYEAD 200
|||.||||:||:||||||:||||.:|.:.|.|:.|.||||..|.|||||.
BPUM_1863___y 150 RSILTDALYCAMYVKLTADSPLEEIPPLHEQINPMIPFIESSLERVYEAH 199
BSNT_03154___ 201 STRQVLKIVEDLMDGLEEVLDKDMLNTYFFLPELDYAKAAEQPLFEEEKK 250
||..:..||::||:|.:|:|||||||||||.|||||.|||::|||.:.|:
BPUM_1863___y 200 STGDIAVIVKELMEGFDELLDKDMLNTYFFFPELDYEKAAKEPLFHDLKR 249
BSNT_03154___ 251 APKLSDDITLPKQSDGDEDIHEEEMPTWHRETEAPSKSFLQFDIEHGAKS 300
.||||:||.:.::.:||||||||.|..||||||||||||||||:|||.||
BPUM_1863___y 250 KPKLSEDIKVDREKEGDEDIHEEYMEVWHRETEAPSKSFLQFDLEHGGKS 299
BSNT_03154___ 301 DLGKDASREGDDGDQALGSVQGSARQTKRKDYSKLEALESQKDQPNGA-G 349
||||||:|||||||||||:|||||:||.|||||||||||..:.:.:|| .
BPUM_1863___y 300 DLGKDAAREGDDGDQALGTVQGSAKQTHRKDYSKLEALEEAEGEESGADA 349
BSNT_03154___ 350 MADGKENKYAFPIYKEPQPATSEEELSYKQQAKTIESYQKRLKQMIQKTL 399
..:|||||||||:...|:|...|:...|||.||.||.|||||||||||||
BPUM_1863___y 350 HENGKENKYAFPVMISPEPPAPEQIDVYKQHAKEIEPYQKRLKQMIQKTL 399
BSNT_03154___ 400 EHKKTLPRTDLHAGRLNNKLLRYFTERNPRLFYKKQEPSTEIDAVFTLLV 449
|||||.|:||||||||:.||:|||||.|||||||||.|||||||||||||
BPUM_1863___y 400 EHKKTWPKTDLHAGRLSKKLIRYFTESNPRLFYKKQAPSTEIDAVFTLLV 449
BSNT_03154___ 450 DCSASMFDKMDETKRGIVLFHEALKSVAVPHQIVGFWEDTNDATETSQPN 499
||||||||||||||:||||||||||||.|||||||||||||||:||||||
BPUM_1863___y 450 DCSASMFDKMDETKKGIVLFHEALKSVQVPHQIVGFWEDTNDASETSQPN 499
BSNT_03154___ 500 YFNTVIPFQSSLRQDSGPAIMQLEPEEDNRDGYAIRQMTKKMLHRSEAQK 549
|||||:.|:.|| .|:||:||.||||||||||||||||||.:|.|.|.||
BPUM_1863___y 500 YFNTVVSFKDSL-FDAGPSIMSLEPEEDNRDGYAIRQMTKMILKRREEQK 548
BSNT_03154___ 550 FLIVFSDGEPAAFGYEQNGIVDTSEAVIEARKRGIEVINVFLSNSEIEES 599
|||||||||||||.|||||||||.|||:||||:||||||||||||.|||:
BPUM_1863___y 549 FLIVFSDGEPAAFSYEQNGIVDTHEAVLEARKKGIEVINVFLSNSPIEEA 598
BSNT_03154___ 600 QMKTIQDMYGKFSIFVPDVDQLPDVLYPLLKKLLHKSIG- 638
||||||||||||||||||||.||||||||||||||||||
BPUM_1863___y 599 QMKTIQDMYGKFSIFVPDVDTLPDVLYPLLKKLLHKSIGA 638
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