Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03152 and BPUM_1861
See
DNA alignment /
Visit
BSNT_03152 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence pep-align/BSNT_03152___odhB.1.24716.seq
# -bsequence pep-align/BPUM_1861___odhB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03152___odhB-BPUM_1861___odhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03152___odhB-BPUM_1861___odhB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03152___odhB
# 2: BPUM_1861___odhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 426
# Identity: 347/426 (81.5%)
# Similarity: 379/426 (89.0%)
# Gaps: 17/426 ( 4.0%)
# Score: 1681.5
#
#
#=======================================
BSNT_03152___ 1 MAEIKVPELAESISEGTIAQWLKQPGDYVEQGEYLLELETDKVNVELTAE 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1861___o 1 MAEIKVPELAESISEGTIAQWLKQPGDYVEQGEYLLELETDKVNVELTAE 50
BSNT_03152___ 51 ESGVLQEVLKDSGDTVQVGEIIGTISEG-AGESSAPAPTEKAESKESVKE 99
|||||:||||||||||||||:||||:.| ||.|.:.||..:.||..:.|:
BPUM_1861___o 51 ESGVLKEVLKDSGDTVQVGEVIGTIAAGEAGGSESAAPAPEQESAPAPKD 100
BSNT_03152___ 100 EKQAEPAAQEVSEEAQSEAKS---RTIASPSARKLAREKGIDLSQVPTGD 146
||||.:..|..:.|.|| ||||||:|||||||||:|||::||.|
BPUM_1861___o 101 ----EPAAAQKEEAVKEEPKSGNGRTIASPAARKLAREKGLDLSEIPTVD 146
BSNT_03152___ 147 PLGRVRKQDVEAYEK---PASKPAPQQKQQPQAQKAQQSFE--KPVEVQK 191
||||||||||.:|:| |||.| |..|:|..|.|:.: ||||.::
BPUM_1861___o 147 PLGRVRKQDVASYQKNEAPASAP----KAAPKANAAVQNEQAGKPVERER 192
BSNT_03152___ 192 MSRRRQTIAKRLVEVQQTSAMLTTFNEVDMTAVMNLRKRRKDQFFEQNEV 241
||||||||||||||||||:|||||||||||||||:|||||||.|.|||:|
BPUM_1861___o 193 MSRRRQTIAKRLVEVQQTAAMLTTFNEVDMTAVMDLRKRRKDAFLEQNDV 242
BSNT_03152___ 242 KLGFMSFFTKAVVAALKKYPLLNAEIQGDELIVKKFYDIGIAVAADEGLV 291
|||||||||||||||||||||||||||||||::||||||||||||:||||
BPUM_1861___o 243 KLGFMSFFTKAVVAALKKYPLLNAEIQGDELVLKKFYDIGIAVAANEGLV 292
BSNT_03152___ 292 VPVVRDADRLTFAGIEKEIGELAKKARNNKLTLSELQGGSFTITNGGTFG 341
||||||||||:|||||||||.||||||:|||:|:||||||||||||||||
BPUM_1861___o 293 VPVVRDADRLSFAGIEKEIGHLAKKARDNKLSLNELQGGSFTITNGGTFG 342
BSNT_03152___ 342 SLMSTPILNSPQVGILGMHKIQLRPVAIDEERFENRPMMYIALSYDHRIV 391
||:|||||||||||||||||||||||||||||||||||||:|||||||||
BPUM_1861___o 343 SLLSTPILNSPQVGILGMHKIQLRPVAIDEERFENRPMMYLALSYDHRIV 392
BSNT_03152___ 392 DGKEAVGFLVTIKNLLEDPEQLLLEG 417
||||||||||||||||||||||||||
BPUM_1861___o 393 DGKEAVGFLVTIKNLLEDPEQLLLEG 418
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.