Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03149 and BPUM_1859

See DNA alignment / Visit BSNT_03149 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:38
# Commandline: needle
#    -asequence pep-align/BSNT_03149___sodF.1.24716.seq
#    -bsequence pep-align/BPUM_1859___sodF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03149___sodF-BPUM_1859___sodF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03149___sodF-BPUM_1859___sodF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03149___sodF
# 2: BPUM_1859___sodF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     159/281 (56.6%)
# Similarity:   204/281 (72.6%)
# Gaps:          11/281 ( 3.9%)
# Score: 881.0
# 
#
#=======================================

BSNT_03149___      1 MKRESYQTEMFNWCEALKDQIQKRGQLDQFEDQIDKMIEALEDDQTTEED     50
                     |.:|.|:.::.:|..:::|.||.    |....:.:.:...:.|:.::||:
BPUM_1859___s      1 MNKEEYRMQLKDWLSSIQDAIQD----DNIRQKAEHLSFIMNDEHSSEEE     46

BSNT_03149___     51 WYKQAAALYRDITESDDTSERRAYVPIGKHVLPKLPYKYSALEPYISRDI    100
                     ||..|.::..||...|...:    |.:|.|.||.|||:|.||||:||::|
BPUM_1859___s     47 WYTLAESIAEDIIPQDAIRD----VAVGGHQLPPLPYRYDALEPFISKEI     92

BSNT_03149___    101 MVLHHTKHHQSYVDGLNKAESELKKARATKNYDLITHWERELAFHGAGHY    150
                     |.|||.|||||||||||:||..||:||.|.::.:|.||||||||:|||||
BPUM_1859___s     93 MYLHHQKHHQSYVDGLNQAELALKRARRTNDFKMIKHWERELAFNGAGHY    142

BSNT_03149___    151 LHSIFWFSMHPNGKRRPTGALFQMIDLSFGSYSAFKEHFTQAAKKVEGVG    200
                     ||.||||||.|:|||:|||.:.:.|:.||.||.|||..|:.|||:|||||
BPUM_1859___s    143 LHCIFWFSMSPSGKRKPTGQMLRQIEQSFESYDAFKAQFSAAAKQVEGVG    192

BSNT_03149___    201 WAILVWAPRSGRLEILTAEKHQ---QWDVIPLLPLDVWEHAYYLQYKNDR    247
                     ||||||||||.|||||.||:||   ||||||||.||||||||||||.|::
BPUM_1859___s    193 WAILVWAPRSQRLEILQAERHQFLSQWDVIPLLALDVWEHAYYLQYLNEK    242

BSNT_03149___    248 ASYVDHWWNVVDWREAEKRFEQAKEVVWKLY    278
                     |:|||.|||||||.|.|.|.:||::|.|..:
BPUM_1859___s    243 AAYVDRWWNVVDWHEPEARLKQAQQVKWTPF    273


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