Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03148 and BPUM_1858

See DNA alignment / Visit BSNT_03148 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:38
# Commandline: needle
#    -asequence pep-align/BSNT_03148___sqhC.1.24716.seq
#    -bsequence pep-align/BPUM_1858___sqhC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03148___sqhC-BPUM_1858___sqhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03148___sqhC-BPUM_1858___sqhC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03148___sqhC
# 2: BPUM_1858___sqhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity:     341/639 (53.4%)
# Similarity:   448/639 (70.1%)
# Gaps:          22/639 ( 3.4%)
# Score: 1801.5
# 
#
#=======================================

BSNT_03148___      1 MGTLQEKVRRFQKKTITELRDRQNADGSWTFCFEGPIMTNSFFILLLTSL     50
                     |...:.||..:..:...:::.||..||::.|||||.:|||:|.|:||.::
BPUM_1858___s      1 MQDFKTKVNVYMDELHMQMQHRQREDGAFVFCFEGSMMTNAFLIMLLKAV     50

BSNT_03148___     51 DEGENEKELISSLAAGIHAKQQPDGTFINYPDETCGNLTATVQGYVGMLA    100
                       |:.::.|:..||..|..||..||:|..|.|: .|::|||||||.|||.
BPUM_1858___s     51 --GDTDQALVHQLAEAIREKQNEDGSFSLYHDQ-AGHVTATVQGYCGMLV     97

BSNT_03148___    101 SGCFHRSEPHMKKAEQFIISYGGLRHVHFMTKWMLAANGLYPWPALYLPL    150
                     ||.:.:.||||:||.::|.|.|||:.||||||||||.||::|||..|.||
BPUM_1858___s     98 SGRYQQDEPHMEKAARYIRSKGGLKDVHFMTKWMLAVNGMHPWPYFYAPL    147

BSNT_03148___    151 SLMALPPTLPIHFYQFSSYARIHFAPMAVTLNQRFVLINRNISSLRHLDP    200
                     |.:.:|...|:|||..|:||||||.||.:.||:|:. .:....||.|||.
BPUM_1858___s    148 SFLLIPTYFPLHFYHLSAYARIHFVPMMIALNKRYT-SHEQFPSLSHLDA    196

BSNT_03148___    201 HMTKNPFTWLRSDAFDERDLTSILSHWKRVFHAPFAFQQLGLQTAKTYML    250
                     :|:||||.|..  |.:||.....|::.:........|...|.:.||.||.
BPUM_1858___s    197 NMSKNPFDWFM--AREERSTHHFLAYMRSYTALDSRFDFFGYEAAKRYMF    244

BSNT_03148___    251 DRIEKDGTLYSYASATIYMVYSLLSLGVSRYSP---IIRRAITGIKSLVT    297
                     ||:|||||||||.||:|:|||:|:|||   |||   :|.:|:.|:|.|||
BPUM_1858___s    245 DRLEKDGTLYSYLSASIFMVYALMSLG---YSPGHHLILKAVKGMKQLVT    291

BSNT_03148___    298 KCNGIPYLENSTSTVWDTALISYALQKNGVTETDGSVTKAADFLLERQHT    347
                     .|.|..|.||||||||||||:|||.|:.|.|:.|..:.|:..:||.||..
BPUM_1858___s    292 DCGGKKYAENSTSTVWDTALVSYASQRAGRTQDDPVIKKSFTYLLNRQQM    341

BSNT_03148___    348 KTADWSVKNPNSVPGGWGFSNINTNNPDCDDTAAVLKAIPRNHSPAAWER    397
                     |.|||::.|.::.|||:|||::||||||||||..||||||:.::|..|:|
BPUM_1858___s    342 KKADWAIHNRHAAPGGFGFSDLNTNNPDCDDTQIVLKAIPQTYAPVQWKR    391

BSNT_03148___    398 GVSWLLSMQNNDGGFSAFEKNVNHPLIRLLPLESAEDAAVDPSTADLTGR    447
                     |..|||||||.||||||||||.:|.|:|.||||||||||:||||.|:|||
BPUM_1858___s    392 GFDWLLSMQNRDGGFSAFEKNQDHFLLRHLPLESAEDAAIDPSTPDITGR    441

BSNT_03148___    448 VLHFLGEKVGFTEKQQHIQR----AVKWLFEHQEQNGSWYGRWGVCYIYG    493
                     |||.:..:.  .:|...:||    .||||.:|||::||||||||||||||
BPUM_1858___s    442 VLHLIASEE--NDKSPLMQRQKDHCVKWLLDHQEKDGSWYGRWGVCYIYG    489

BSNT_03148___    494 TWAALTGMHACGVDRKHPGIQKALRWLKSIQNDDGSWGESCKSAEIKTYV    543
                     |||||||:.|.|:...||.:|||.|:||:||.:|||:||||||:|:|.||
BPUM_1858___s    490 TWAALTGLKASGIPSSHPAVQKACRFLKTIQLEDGSFGESCKSSEVKRYV    539

BSNT_03148___    544 PLHRGTIVQTAWALDALLTYENSEHPSVVKGMQYLTDSSSHSADSLAYPA    593
                     ||..||:||||||.:|||.|...:..|::|.:.:|. ...||:.:|.||.
BPUM_1858___s    540 PLPFGTVVQTAWAAEALLQYVQPDDKSILKAISFLI-QHQHSSKALHYPV    588

BSNT_03148___    594 GIGLPKQFYIRYHSYPYVFSLLAVGKYLDSIEKETANET    632
                     ||||||||||.|||||:||.::|...:|:.:.::  || 
BPUM_1858___s    589 GIGLPKQFYITYHSYPFVFPMMACSTFLEEMRRK--NE-    624


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