Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03148 and BPUM_1858
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence pep-align/BSNT_03148___sqhC.1.24716.seq
# -bsequence pep-align/BPUM_1858___sqhC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03148___sqhC-BPUM_1858___sqhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03148___sqhC-BPUM_1858___sqhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03148___sqhC
# 2: BPUM_1858___sqhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity: 341/639 (53.4%)
# Similarity: 448/639 (70.1%)
# Gaps: 22/639 ( 3.4%)
# Score: 1801.5
#
#
#=======================================
BSNT_03148___ 1 MGTLQEKVRRFQKKTITELRDRQNADGSWTFCFEGPIMTNSFFILLLTSL 50
|...:.||..:..:...:::.||..||::.|||||.:|||:|.|:||.::
BPUM_1858___s 1 MQDFKTKVNVYMDELHMQMQHRQREDGAFVFCFEGSMMTNAFLIMLLKAV 50
BSNT_03148___ 51 DEGENEKELISSLAAGIHAKQQPDGTFINYPDETCGNLTATVQGYVGMLA 100
|:.::.|:..||..|..||..||:|..|.|: .|::|||||||.|||.
BPUM_1858___s 51 --GDTDQALVHQLAEAIREKQNEDGSFSLYHDQ-AGHVTATVQGYCGMLV 97
BSNT_03148___ 101 SGCFHRSEPHMKKAEQFIISYGGLRHVHFMTKWMLAANGLYPWPALYLPL 150
||.:.:.||||:||.::|.|.|||:.||||||||||.||::|||..|.||
BPUM_1858___s 98 SGRYQQDEPHMEKAARYIRSKGGLKDVHFMTKWMLAVNGMHPWPYFYAPL 147
BSNT_03148___ 151 SLMALPPTLPIHFYQFSSYARIHFAPMAVTLNQRFVLINRNISSLRHLDP 200
|.:.:|...|:|||..|:||||||.||.:.||:|:. .:....||.|||.
BPUM_1858___s 148 SFLLIPTYFPLHFYHLSAYARIHFVPMMIALNKRYT-SHEQFPSLSHLDA 196
BSNT_03148___ 201 HMTKNPFTWLRSDAFDERDLTSILSHWKRVFHAPFAFQQLGLQTAKTYML 250
:|:||||.|.. |.:||.....|::.:........|...|.:.||.||.
BPUM_1858___s 197 NMSKNPFDWFM--AREERSTHHFLAYMRSYTALDSRFDFFGYEAAKRYMF 244
BSNT_03148___ 251 DRIEKDGTLYSYASATIYMVYSLLSLGVSRYSP---IIRRAITGIKSLVT 297
||:|||||||||.||:|:|||:|:||| ||| :|.:|:.|:|.|||
BPUM_1858___s 245 DRLEKDGTLYSYLSASIFMVYALMSLG---YSPGHHLILKAVKGMKQLVT 291
BSNT_03148___ 298 KCNGIPYLENSTSTVWDTALISYALQKNGVTETDGSVTKAADFLLERQHT 347
.|.|..|.||||||||||||:|||.|:.|.|:.|..:.|:..:||.||..
BPUM_1858___s 292 DCGGKKYAENSTSTVWDTALVSYASQRAGRTQDDPVIKKSFTYLLNRQQM 341
BSNT_03148___ 348 KTADWSVKNPNSVPGGWGFSNINTNNPDCDDTAAVLKAIPRNHSPAAWER 397
|.|||::.|.::.|||:|||::||||||||||..||||||:.::|..|:|
BPUM_1858___s 342 KKADWAIHNRHAAPGGFGFSDLNTNNPDCDDTQIVLKAIPQTYAPVQWKR 391
BSNT_03148___ 398 GVSWLLSMQNNDGGFSAFEKNVNHPLIRLLPLESAEDAAVDPSTADLTGR 447
|..|||||||.||||||||||.:|.|:|.||||||||||:||||.|:|||
BPUM_1858___s 392 GFDWLLSMQNRDGGFSAFEKNQDHFLLRHLPLESAEDAAIDPSTPDITGR 441
BSNT_03148___ 448 VLHFLGEKVGFTEKQQHIQR----AVKWLFEHQEQNGSWYGRWGVCYIYG 493
|||.:..:. .:|...:|| .||||.:|||::||||||||||||||
BPUM_1858___s 442 VLHLIASEE--NDKSPLMQRQKDHCVKWLLDHQEKDGSWYGRWGVCYIYG 489
BSNT_03148___ 494 TWAALTGMHACGVDRKHPGIQKALRWLKSIQNDDGSWGESCKSAEIKTYV 543
|||||||:.|.|:...||.:|||.|:||:||.:|||:||||||:|:|.||
BPUM_1858___s 490 TWAALTGLKASGIPSSHPAVQKACRFLKTIQLEDGSFGESCKSSEVKRYV 539
BSNT_03148___ 544 PLHRGTIVQTAWALDALLTYENSEHPSVVKGMQYLTDSSSHSADSLAYPA 593
||..||:||||||.:|||.|...:..|::|.:.:|. ...||:.:|.||.
BPUM_1858___s 540 PLPFGTVVQTAWAAEALLQYVQPDDKSILKAISFLI-QHQHSSKALHYPV 588
BSNT_03148___ 594 GIGLPKQFYIRYHSYPYVFSLLAVGKYLDSIEKETANET 632
||||||||||.|||||:||.::|...:|:.:.:: ||
BPUM_1858___s 589 GIGLPKQFYITYHSYPFVFPMMACSTFLEEMRRK--NE- 624
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