Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03143 and BPUM_1855

See DNA alignment / Visit BSNT_03143 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:38
# Commandline: needle
#    -asequence pep-align/BSNT_03143___yozO.1.24716.seq
#    -bsequence pep-align/BPUM_1855___yozO.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03143___yozO-BPUM_1855___yozO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03143___yozO-BPUM_1855___yozO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03143___yozO
# 2: BPUM_1855___yozO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:      83/114 (72.8%)
# Similarity:   103/114 (90.4%)
# Gaps:           2/114 ( 1.8%)
# Score: 439.0
# 
#
#=======================================

BSNT_03143___      1 MGIFSVSRSTDAKKLEALLVEGERIESIYKLRVDQICFTNKRIIFFDNKM     50
                     |||||||:..| ||.|:||:||||||::|:||.|||||||||:||.||::
BPUM_1855___y      1 MGIFSVSKQND-KKFESLLIEGERIEAVYRLRHDQICFTNKRLIFGDNRV     49

BSNT_03143___     51 FSKKKVRVFLPYKTIESFAIQEAGMFDPDTGLLLMTRSKTFELEFAKDTD    100
                     ||||||||.|||::||||||||||:||.|||:||:|.||.|||:|:|:||
BPUM_1855___y     50 FSKKKVRVSLPYRSIESFAIQEAGVFDQDTGMLLVTSSKVFELDFSKETD     99

BSNT_03143___    101 LSEVQAVLTKHLCS    114
                     |::|||:|||||| 
BPUM_1855___y    100 LNDVQAILTKHLC-    112


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