Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03143 and BPUM_1855
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence dna-align/BSNT_03143___yozO.1.24716.seq
# -bsequence dna-align/BPUM_1855___yozO.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03143___yozO-BPUM_1855___yozO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03143___yozO-BPUM_1855___yozO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03143___yozO
# 2: BPUM_1855___yozO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 355
# Identity: 245/355 (69.0%)
# Similarity: 245/355 (69.0%)
# Gaps: 26/355 ( 7.3%)
# Score: 781.0
#
#
#=======================================
BSNT_03143___ 1 TTGGGTATTTTTTCTGTTAGCAGATCAACGGACGCAAAGAAGCTTGAGGC 50
.||||||||||||||||.||.|.|..|| |.|..|||||..|.||..|
BPUM_1855___y 1 GTGGGTATTTTTTCTGTCAGTAAACAAA---ATGATAAGAAATTCGAATC 47
BSNT_03143___ 51 TTTGCTCGTTGAAGGGGAAAGAATAGAATCGATTTATAAGCTCCGAGTGG 100
.||.||..||||||||||||||||.|||.|..||||.|..||.||....|
BPUM_1855___y 48 CTTACTAATTGAAGGGGAAAGAATTGAAGCTGTTTACAGACTGCGTCACG 97
BSNT_03143___ 101 ACCAAATTTGCTTTACAAATAAGCGGATCATTTTCTTTGACAATAA---A 147
||||||||||.||.||.|||||.||..|.| ||||||.|.|||| .
BPUM_1855___y 98 ACCAAATTTGTTTCACCAATAAACGACTGA---TCTTTGGCGATAACCGC 144
BSNT_03143___ 148 ATGTTTTCTAAAAAGAAGGTTCGTGTATTTCTT-CCATATAAAACAATTG 196
.|.||||||||||||||.||..|.|| .|.||| ||.|||..|.||||||
BPUM_1855___y 145 GTATTTTCTAAAAAGAAAGTCAGGGT-CTCCTTGCCGTATCGATCAATTG 193
BSNT_03143___ 197 AAAGCTTTGCCATTCAAGAAGCGGGAATGTTTGATCCGGACACTGGGCT- 245
||||.|||||||||||||||||.||..|||||||||.||||||.||..|
BPUM_1855___y 194 AAAGTTTTGCCATTCAAGAAGCTGGCGTGTTTGATCAGGACACAGGTATG 243
BSNT_03143___ 246 TTTATTGATGACAAG-----AAGCAAAACGTTCGAATTAGAATTTGCGAA 290
||..||| |.||||| |||.| ||.|||.|.||.|||.||||
BPUM_1855___y 244 TTGCTTG-TCACAAGCTCAAAAGTA-----TTTGAACTCGATTTTTCGAA 287
BSNT_03143___ 291 AGACACCGATTTAAGCGAGGTTCAGGCGGTGCTGACAAAGCATTTGTGCA 340
|||.||.|||||.|..||.||.||.||..|..|||||||.|||.|.|
BPUM_1855___y 288 AGAGACGGATTTGAATGATGTGCAAGCCATTTTGACAAAACATCTTT--- 334
BSNT_03143___ 341 GCTGA 345
|||||
BPUM_1855___y 335 GCTGA 339
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