Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03594 and BPUM_1848
See
DNA alignment /
Visit
BSNT_03594 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:07
# Commandline: needle
# -asequence pep-align/BSNT_03594___mmgD.1.24716.seq
# -bsequence pep-align/BPUM_1848___mmgD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03594___mmgD-BPUM_1848___mmgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03594___mmgD-BPUM_1848___mmgD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03594___mmgD
# 2: BPUM_1848___mmgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 380
# Identity: 218/380 (57.4%)
# Similarity: 282/380 (74.2%)
# Gaps: 8/380 ( 2.1%)
# Score: 1151.0
#
#
#=======================================
BSNT_03594___ 1 MEEKQHYSPGLDGVIAAETHISYLDTQSSQILIRGYDLIELSETKSYLEL 50
|.|:..|.|||:.::|:||.|||||.|..:|:|||||||||::.|:|||.
BPUM_1848___m 1 MTEQLQYKPGLEDIVASETSISYLDVQQEEIVIRGYDLIELAQKKTYLET 50
BSNT_03594___ 51 VHLLLEGRLPEESEMETLERKINSASSLPADHLRLLELLPKDTHPMDSLR 100
.:||:.||||:..|....::.|:|.::|......:|..|||.|||||::|
BPUM_1848___m 51 AYLLIYGRLPDAMEYHQFQQDISSQTNLHPTIQTILTKLPKTTHPMDAMR 100
BSNT_03594___ 101 TGLSALAGYDRQIDDRSPSANKERAYQLLGKMPALTAASYRIINKKEPIL 150
|.:|||:|||..:.|||.:..:.||.:|||::||:.|.||.|:.|...|.
BPUM_1848___m 101 TCISALSGYDDALQDRSEACQQRRAVRLLGQLPAIVAGSYHILTKDAAIS 150
BSNT_03594___ 151 PLQTLSYSANFLYMMTGKLPSSLEEQIFDRSLVLYSEHEMPNSTFAARVI 200
|.||.||:..||.|:||:.|:..|...||::|.||||||:||||||||||
BPUM_1848___m 151 PDQTKSYTETFLTMLTGRTPTQDEITAFDQTLTLYSEHELPNSTFAARVI 200
BSNT_03594___ 201 ASTHSDLYGALTGAVASLKGNLHGGANEAVMYLLLEAKTTSDFEQLLQTK 250
||||||:|||.|||::||||:||||||||||::|||.|||..|..|::.|
BPUM_1848___m 201 ASTHSDMYGAFTGAISSLKGDLHGGANEAVMHMLLEGKTTEGFLALIERK 250
BSNT_03594___ 251 LKRKEKIMGFGHRVYMKKMDPRALMMKEALQQLCDKAGDHRLYEMCEAGE 300
|..|||:|||||||||:||||||.::|.:|:.|.:..||..||:||.|||
BPUM_1848___m 251 LAAKEKMMGFGHRVYMRKMDPRAALLKRSLKTLTESKGDTTLYDMCVAGE 300
BSNT_03594___ 301 RLMEKEKGLYPNLDYYAAPVYWMLGIPIPLYTPIFFSARTSGLCAHVIEQ 350
..|:::|.|||||||||||:|::|||||.|||||||:||.|||.||||||
BPUM_1848___m 301 AYMKEKKNLYPNLDYYAAPIYYVLGIPISLYTPIFFAARASGLAAHVIEQ 350
BSNT_03594___ 351 HTNNRLFRPRVSYMGPRYQTKP-------- 372
|.:||:|||||.|:|||.....
BPUM_1848___m 351 HLHNRIFRPRVRYLGPRGLKVSDDDRKKGE 380
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.