Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03593 and BPUM_1847

See DNA alignment / Visit BSNT_03593 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence pep-align/BSNT_03593___prpD.1.24716.seq
#    -bsequence pep-align/BPUM_1847___prpD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03593___prpD-BPUM_1847___prpD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03593___prpD-BPUM_1847___prpD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03593___prpD
# 2: BPUM_1847___prpD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 478
# Identity:     320/478 (66.9%)
# Similarity:   391/478 (81.8%)
# Gaps:           6/478 ( 1.3%)
# Score: 1719.0
# 
#
#=======================================

BSNT_03593___      1 ------MPKTDRVIEEITDYVLEKEITSAEAYTTAGHVLLDTLGCGILAL     44
                           ..:||:::|||..|.::.||||.||..||.:||:||||||:|||
BPUM_1847___p      1 MNKTAVANQTDQLLEEIAAYAVDGEITSKEAIETARYVLIDTLGCGMLAL     50

BSNT_03593___     45 RYPECTKLLGPIVPGTTVPNGSKVPGTSYVLDPVRAAFNIGCMIRWLDYN     94
                     .:|||||.||||||||.||||::|||||:|||||:|||:|||||||||||
BPUM_1847___p     51 NFPECTKHLGPIVPGTVVPNGARVPGTSFVLDPVQAAFDIGCMIRWLDYN    100

BSNT_03593___     95 DTWLAAEWGHPSDNLGGILAAADYVSRVRLSEGKEPLTVSDVLEMMIKAH    144
                     ||||||||||||||||||||.:||:||.||:.|:|||:::|||..::|||
BPUM_1847___p    101 DTWLAAEWGHPSDNLGGILAVSDYISRTRLANGEEPLSMNDVLHAIVKAH    150

BSNT_03593___    145 EIQGVLALENSLNRVGLDHVLFVKVATTAVAAKLLGGGREEIKNALSNAW    194
                     ||||||||||.|||.||||||||||||:||...||||.:|::::.||.|:
BPUM_1847___p    151 EIQGVLALENCLNRNGLDHVLFVKVATSAVVCALLGGTKEDVQHVLSQAF    200

BSNT_03593___    195 IDNAALRTYRHSPNTGSRKSWAAGDATSRGVHLALMSLKGEMGYPTALSA    244
                     :||:.||||||:|||||||||||||||||||.||:|:|||||||.|.|||
BPUM_1847___p    201 VDNSPLRTYRHAPNTGSRKSWAAGDATSRGVRLAMMTLKGEMGYQTPLSA    250

BSNT_03593___    245 PGWGFQDVLFNKKEIKLACPLDAYVMENVLFKVSYPAEFHAQTAAECAVI    294
                     ..|||:|||...|.:.||.||.:||:||||||::||||||||||||.|:|
BPUM_1847___p    251 EKWGFEDVLMKGKSLTLAQPLGSYVIENVLFKIAYPAEFHAQTAAEAAMI    300

BSNT_03593___    295 LHPQVKNRIDEIDRVVIRTHESAIRIIDKKGPLHNPADRDHCLQYITAIG    344
                     ||..||:|:||||||.|.|||||||||||||||:||||||||||||||||
BPUM_1847___p    301 LHDAVKDRLDEIDRVEITTHESAIRIIDKKGPLYNPADRDHCLQYITAIG    350

BSNT_03593___    345 LLFGDITAQHYEAETASDPRIDKLRDKMEVTENKTYTEDYLKPDKRSISN    394
                     |::|::||.|||.|||.:|.||:|||:|.|.|:..||.|||.|.||||:|
BPUM_1847___p    351 LIYGELTADHYEEETAQNPAIDRLRDQMVVKEDTQYTADYLDPKKRSIAN    400

BSNT_03593___    395 AVQVHFKDGTSTEMVECEFPLGHRFRREEAVPKLLEKFSDNLKTHYPDKQ    444
                     :||:.|||||.|:.:|.|:|||||.||:|.:|.|.:|:..:|||.:|.||
BPUM_1847___p    401 SVQIFFKDGTMTDRIEIEYPLGHRRRRQEGIPLLEKKWIYHLKTRFPQKQ    450

BSNT_03593___    445 HKHIYERCTSYETLQTMRVNEFVDMFCM    472
                     ..||...|.:...|:|..|..|:|:|.:
BPUM_1847___p    451 VDHIVSLCQNPNQLKTTTVPAFMDLFVI    478


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