Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03591 and BPUM_1846

See DNA alignment / Visit BSNT_03591 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence pep-align/BSNT_03591___yqiQ.1.24716.seq
#    -bsequence pep-align/BPUM_1846___yqiQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03591___yqiQ-BPUM_1846___yqiQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03591___yqiQ-BPUM_1846___yqiQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03591___yqiQ
# 2: BPUM_1846___yqiQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     188/306 (61.4%)
# Similarity:   239/306 (78.1%)
# Gaps:           6/306 ( 2.0%)
# Score: 986.0
# 
#
#=======================================

BSNT_03591___      1 MSWIVNKQSSQEELAGRFRKLMSAPDILQIPGAHDGMAALLAKEAGFSAI     50
                      .||||.:|||..||..|::.|....:.||||.||||:||.||:.||..:
BPUM_1846___y      1 -MWIVNDESSQANLAAAFQEQMHKSALFQIPGVHDGMSALYAKKMGFQGL     49

BSNT_03591___     51 YLSGAAYTASRGLPDLGIITSAEIAERAKDLVRAADLPLLVDIDTGFGGV    100
                     ||||||:.||:||||||:|.|.|:||:||:::||:.||||||:|||:|||
BPUM_1846___y     50 YLSGAAFCASKGLPDLGMIHSTEMAEKAKEIIRASQLPLLVDMDTGYGGV     99

BSNT_03591___    101 LNAARTAREMLEARVAAVQIEDQQLPKKCGHLNGKQLVPIKEMAQKIKAI    150
                     |||||.|:||:|::||||||||||:||||||||||.|||::||..|||||
BPUM_1846___y    100 LNAARAAKEMVESKVAAVQIEDQQMPKKCGHLNGKSLVPVEEMVAKIKAI    149

BSNT_03591___    151 KQAAPSLIVVARTDARAQEGLDAAIKRSEAYIEAGADAIFPEALQAENEF    200
                     |||||:|:|:|||||::..|::..|:|:..|:||||||||||||....:|
BPUM_1846___y    150 KQAAPTLLVIARTDAKSVSGMEDVIRRANLYVEAGADAIFPEALITAEDF    199

BSNT_03591___    201 RQFAERISVPLLANMTEFGKTPYYRADEFEDMGFHMVIYPVTSLRAAAKA    250
                     ...:..|..|||||||||||||||.||||...||.||||||:|||.|||:
BPUM_1846___y    200 THASNNIKGPLLANMTEFGKTPYYHADEFSMFGFQMVIYPVSSLRVAAKS    249

BSNT_03591___    251 CERMFGLMKEHGSQKEGLHDMQTRKELYDTISYYDYEALDKTIAKTVLPD    300
                     .||:|..:.|.|:|:..|.|||||:|||:||.|.:||.:|:.:|||:||:
BPUM_1846___y    250 YERLFTEIMEKGTQQGMLKDMQTRQELYETIHYDEYEEMDQHLAKTILPE    299

BSNT_03591___    301 E-----    301
                     .     
BPUM_1846___y    300 IGKEHR    305


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.