Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03116 and BPUM_1845
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence pep-align/BSNT_03116___yocA.1.24716.seq
# -bsequence pep-align/BPUM_1845___yocA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03116___yocA-BPUM_1845___yocA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03116___yocA-BPUM_1845___yocA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03116___yocA
# 2: BPUM_1845___yocA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 151/227 (66.5%)
# Similarity: 186/227 (81.9%)
# Gaps: 9/227 ( 4.0%)
# Score: 801.5
#
#
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BSNT_03116___ 1 MKKKRKGCFAAAGFMMIFVFVIASFLL--VLLFFNRDLVKKLPIDTKTIV 48
||||:.||||.:|...||:|| |:| :::.||:..:|||||||::||
BPUM_1845___y 1 MKKKKTGCFAISGCFTIFLFV---FVLAAIVMSFNQKELKKLPIDTESIV 47
BSNT_03116___ 49 LERLTDYKPLVEEELESQGLSNYTSLILGMMYQESKGKGNDPMQSSESLG 98
|.||.|:|||||.||..|.|..||:||||||||||||:|.||||||||||
BPUM_1845___y 48 LSRLDDFKPLVETELRDQDLDQYTALILGMMYQESKGRGGDPMQSSESLG 97
BSNT_03116___ 99 LKRNEITDPQLSVKQGIKQFTLMYKTGKEKGVDLDTIIQSYNMGAGYIDF 148
||||||.|||.|:|||:..|:.|||.||:|||||:|||||||||.|||||
BPUM_1845___y 98 LKRNEINDPQKSIKQGVHHFSTMYKHGKKKGVDLETIIQSYNMGIGYIDF 147
BSNT_03116___ 149 VAEHGGTHTEELAKQYSEQQVKKNPDLYTCGGNAKNFRYPYCYGDYTYAE 198
||::||.|:|:||||||::|||:||::||||||..|||||||:||:||||
BPUM_1845___y 148 VAKNGGKHSEKLAKQYSKKQVKRNPEVYTCGGNKDNFRYPYCFGDFTYAE 197
BSNT_03116___ 199 KVKEKTKTVEESLQVATLETMESKAHE 225
|||||||||||.:::|:..:..|
BPUM_1845___y 198 KVKEKTKTVEEKMKLASSSSPSS---- 220
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