Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03111 and BPUM_1842
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence pep-align/BSNT_03111___yobW.1.24716.seq
# -bsequence pep-align/BPUM_1842.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03111___yobW-BPUM_1842.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03111___yobW-BPUM_1842.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03111___yobW
# 2: BPUM_1842
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 49/185 (26.5%)
# Similarity: 82/185 (44.3%)
# Gaps: 15/185 ( 8.1%)
# Score: 177.5
#
#
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BSNT_03111___ 1 -MHLTLQSVYPAMIIIFFLYKKIKRSIGYQPLKPRWLFTRIILFSLFAFG 49
.|...|......||:..:..::.|...||.::|..|..|:.||.|.|..
BPUM_1842 1 MTHNVWQLFMIGSIILICIMIRMNRMRRYQLVRPIRLLMRMYLFGLSALI 50
BSNT_03111___ 50 LSIFSAIHPFLYGYLILGILGGWLLVFFAKKNISFEKRRGKIYFRTHIWV 99
|......:..:..|..:|:|.|..|...|.:.|..::..|::|.:|..|:
BPUM_1842 51 LLSEGWQNHSIIIYAAIGMLFGSSLAVHAYQTIRMKEENGRLYMKTSKWI 100
BSNT_03111___ 100 EVILLTLFLSRFLYRVTELYLTSPDLNSLG---SYSQSIGTDPLTIGVCF 146
|..:|.|||||..:::.| ||:..:..:. .|...:..|.:|:...|
BPUM_1842 101 ESFILCLFLSRLSFKLVE--LTNHSITKISVVELYQHIVSDDAMTMLSFF 148
BSNT_03111___ 147 LIAVYYIGFSSFVIKLSRNELEQHEYNKEKDILAR 181
|:|.||:.||..::|.|:.....|..
BPUM_1842 149 LLAAYYVVFSFHMMKASKRSTHVHHA--------- 174
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