Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03111 and BPUM_1842

See DNA alignment / Visit BSNT_03111 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_03111___yobW.1.24716.seq
#    -bsequence pep-align/BPUM_1842.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03111___yobW-BPUM_1842.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03111___yobW-BPUM_1842.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03111___yobW
# 2: BPUM_1842
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity:      49/185 (26.5%)
# Similarity:    82/185 (44.3%)
# Gaps:          15/185 ( 8.1%)
# Score: 177.5
# 
#
#=======================================

BSNT_03111___      1 -MHLTLQSVYPAMIIIFFLYKKIKRSIGYQPLKPRWLFTRIILFSLFAFG     49
                      .|...|......||:..:..::.|...||.::|..|..|:.||.|.|..
BPUM_1842          1 MTHNVWQLFMIGSIILICIMIRMNRMRRYQLVRPIRLLMRMYLFGLSALI     50

BSNT_03111___     50 LSIFSAIHPFLYGYLILGILGGWLLVFFAKKNISFEKRRGKIYFRTHIWV     99
                     |......:..:..|..:|:|.|..|...|.:.|..::..|::|.:|..|:
BPUM_1842         51 LLSEGWQNHSIIIYAAIGMLFGSSLAVHAYQTIRMKEENGRLYMKTSKWI    100

BSNT_03111___    100 EVILLTLFLSRFLYRVTELYLTSPDLNSLG---SYSQSIGTDPLTIGVCF    146
                     |..:|.|||||..:::.|  ||:..:..:.   .|...:..|.:|:...|
BPUM_1842        101 ESFILCLFLSRLSFKLVE--LTNHSITKISVVELYQHIVSDDAMTMLSFF    148

BSNT_03111___    147 LIAVYYIGFSSFVIKLSRNELEQHEYNKEKDILAR    181
                     |:|.||:.||..::|.|:.....|..         
BPUM_1842        149 LLAAYYVVFSFHMMKASKRSTHVHHA---------    174


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