Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03110 and BPUM_1841
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence pep-align/BSNT_03110.1.24716.seq
# -bsequence pep-align/BPUM_1841___yobV.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03110-BPUM_1841___yobV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03110-BPUM_1841___yobV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03110
# 2: BPUM_1841___yobV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity: 128/372 (34.4%)
# Similarity: 189/372 (50.8%)
# Gaps: 63/372 (16.9%)
# Score: 624.0
#
#
#=======================================
BSNT_03110 1 MLIRSEIVAEINTEHKKEGETPVFIAYARCIPPHNRYAQALSKCYDCFCW 50
BPUM_1841___y 0 -------------------------------------------------- 0
BSNT_03110 51 KIQEEKVRRMKLERLLAMVVLLISKKQVQAAELAELFEVSVRTIYRDIET 100
||::|:|:.|:||||||||||.:||||.|||.|||||||:|
BPUM_1841___y 1 ---------MKIDRILSTVMLLISKKQVQAKDLAELHEVSTRTIYRDIDT 41
BSNT_03110 101 INRAGIPIVTSQGSGGGIGIMETYRLEREWLKEEELFAIASALQSVSSMY 150
||:||||:||:||:||||.::|.||||::...::::..|.:||:|:.|.|
BPUM_1841___y 42 INQAGIPVVTTQGAGGGISLVEDYRLEKKLFTDDDIEVILTALESMMSAY 91
BSNT_03110 151 EPISHSTAYQKIKHLIPEQSAQAFK-HQTEKWFIDMTAWGHTEDQKALRE 199
.........:|||.|||.|:.:..| |.. |||:::||.....:...:
BPUM_1841___y 92 SFKESEHVLKKIKSLIPTQTGENEKQHHV---FIDLSSWGKDSQAEQKLQ 138
BSNT_03110 200 KISAAIDRLSTISFTYTSASGETLLRETEPYTLVCKAGHWYLYAYCLVRN 249
.|..|......|.|||.:|.||||.|..||||||.|..||||||:|.|:.
BPUM_1841___y 139 LIHTAASAHQYIQFTYRNAKGETLPRNVEPYTLVLKGRHWYLYAFCCVKK 188
BSNT_03110 250 DFRFFKLNRMKDLAILHQTFIRKDIQLDTLPWDRNWYQKGRLTELVILVQ 299
.||.|||.||..|..:...|..|.::.:..||:.:|.::..::.:.:.:.
BPUM_1841___y 189 AFRLFKLTRMTGLVAISGYFQPKRVKNEEKPWNDSWQEQPSVSPVTLRLT 238
BSNT_03110 300 PAARQRIGEWFGYDVLHCEEDEICRAVISLPEDQWLIGFLLQFGKDIEVL 349
.|:..::.||...:.|:...|....|.|::|...||..||...|.::::|
BPUM_1841___y 239 EASVGKVKEWVDENELNVCSDGTYLATITVPLHDWLNSFLFHLGPEVDIL 288
BSNT_03110 350 QPLHIRDRVKETIHHMQKIYET 371
.|.|:::.....:....|..||
BPUM_1841___y 289 SPKHVKEAFDLQLKQFLKRLET 310
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