Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03107 and BPUM_1839
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence pep-align/BSNT_03107___yobT.1.24716.seq
# -bsequence pep-align/BPUM_1839.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03107___yobT-BPUM_1839.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03107___yobT-BPUM_1839.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03107___yobT
# 2: BPUM_1839
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity: 120/239 (50.2%)
# Similarity: 161/239 (67.4%)
# Gaps: 6/239 ( 2.5%)
# Score: 623.5
#
#
#=======================================
BSNT_03107___ 1 MRITQYQTVWQLTFFPALFPVNCYLVEEENEVTLIDAALPGSYKGIIQAV 50
||:|.:..:.|||..|.|||||||:.||||.:.||||||..:...||:..
BPUM_1839 1 MRLTTFDRLHQLTLMPRLFPVNCYVFEEENGLILIDAALKMAANSIIEFA 50
BSNT_03107___ 51 NQLGKPLQHILLTHAHGDHVGSLDTLAQTFPHAKVMISERDSFLLQGDTS 100
.|..||:..|:|||:|.||:|:||.:.:.||.|.|.:|:||:.|.:||.|
BPUM_1839 51 RQKNKPINKIILTHSHMDHIGALDEVKKVFPEAVVYLSKRDARLFEGDLS 100
BSNT_03107___ 101 LRQDEPQTPIKGGIPKHIQTKPHQLLTGGETIGSLLAIPTPGHTPGSMSF 150
|...|||..|||...|||:|||..|:..|:.||.|..|.||||||||:|.
BPUM_1839 101 LLPGEPQQKIKGSFSKHIRTKPDVLVEEGDEIGPLKVIATPGHTPGSISL 150
BSNT_03107___ 151 LDTRNGTLIAGDAFQLRGGIAVSGQIKWTFPFPAFATWNKEEAIKSAQLL 200
.|.|:..:|||||...:||::|:|:::|||||||||||:.|.|:|||:.|
BPUM_1839 151 YDERSKIVIAGDALVTKGGLSVTGELRWTFPFPAFATWDTETALKSAEKL 200
BSNT_03107___ 201 ADKAPSCLAVGHGNFLRSPAERMRQAI----QKAKKG-- 233
.....||||.|||:.:..|.|:::.|: |:.|||
BPUM_1839 201 LALRLSCLAAGHGDLIIEPHEKLQAAVHKRQQQLKKGEQ 239
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