Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03106 and BPUM_1838
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence pep-align/BSNT_03106___yobS.1.24716.seq
# -bsequence pep-align/BPUM_1838___yobS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03106___yobS-BPUM_1838___yobS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03106___yobS-BPUM_1838___yobS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03106___yobS
# 2: BPUM_1838___yobS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity: 84/196 (42.9%)
# Similarity: 132/196 (67.3%)
# Gaps: 11/196 ( 5.6%)
# Score: 398.0
#
#
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BSNT_03106___ 1 MSPRIGLTQKMIIDAAAEIADQEGVNGVSLAALSKKMNVRPPSLYNHING 50
||||:|:||:.|||.||.:.|:||.:.:::|.|||::|:||||||||::|
BPUM_1838___y 1 MSPRMGITQEKIIDTAAALVDEEGFSALTIATLSKRLNIRPPSLYNHVSG 50
BSNT_03106___ 51 LQAIRAELAVRGLTKLFDQMADSVTE---RKGDSAMLSLAHAYVDFAIEN 97
||.|:|.||.:|||.|.:: ...||| ::| |:|:.|..||.|..|:
BPUM_1838___y 51 LQEIQAALAEKGLTMLREK-GIHVTEGLDKEG--AVLAFAKQYVQFVREH 97
BSNT_03106___ 98 PGYYEAALLKVQDKRMEIVSDQIVCLVTKLLIENGYASEKTAIHATRGLR 147
||.||||...::||::...::::|..|..::...| ..|:...|..||||
BPUM_1838___y 98 PGLYEAAFSHMEDKKVRSEAERLVEFVQSIMTRFG-VKEEEMTHVVRGLR 146
BSNT_03106___ 148 SLLHGFTVLIAKEAFEREEDILESLSFSIRTFLSGLLINNKNIM-- 191
||||||..:..|:.|:|:|.:.||:|::::.::||:| .|..:
BPUM_1838___y 147 SLLHGFGDISNKKGFQRKEQLEESVSYAVKLYISGVL--QKEDLSY 190
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