Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02946 and BPUM_1836
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence pep-align/BSNT_02946___yndH.1.24716.seq
# -bsequence pep-align/BPUM_1836.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02946___yndH-BPUM_1836.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02946___yndH-BPUM_1836.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02946___yndH
# 2: BPUM_1836
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity: 95/210 (45.2%)
# Similarity: 131/210 (62.4%)
# Gaps: 9/210 ( 4.3%)
# Score: 474.0
#
#
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BSNT_02946___ 1 MSSIYEKSIINYHLLHPKLRKRYQLDGSQTFSGTGTMSEISGGSFLVRML 50
..::...:.:|..|||||::|| ::.|:..|||.||.|||.|:|::
BPUM_1836 1 -MVVHRHQVKDYDKLHPKLKERY----NRAFTAEGTMEEIGGGSRLIRLI 45
BSNT_02946___ 51 LKLGVFFRCFFSERGKDIPFTIQNRTCLLKSQHTGIEWNRTFIFKGKKRF 100
.::|..|||||.|||::|||.|.|...:......|:.|.|||.|..|:|.
BPUM_1836 46 FRMGPLFRCFFPERGENIPFQIVNEPFVTNKGEEGMHWYRTFYFPKKERH 95
BSNT_02946___ 101 FDAIMIYDEKENRILDFFGKPHLLLSVLTFEASHDGSLTITSGKQWLLIC 150
|||.||.|::.:.:||:||||.||:|.|.|..:..|.|.|.||:|..|:.
BPUM_1836 96 FDADMIIDQESHTVLDYFGKPRLLVSELHFTVTKHGFLHIQSGRQKFLMF 145
BSNT_02946___ 151 GKRIPLPKWLTGTSVVCETFDEKKNCFTIEVHVQNTILGTLFFYKGTFQE 200
|:..|||.||:|.|.|.|.:||....:||:|||:|.:.||||.|||.|
BPUM_1836 146 GREWPLPSWLSGVSDVTEGYDEYAGEYTIDVHVKNRLFGTLFTYKGRF-- 193
BSNT_02946___ 201 EERESCNEMA 210
.||.|.:|
BPUM_1836 194 TERMSHDE-- 201
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