Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02947 and BPUM_1835
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence pep-align/BSNT_02947___yndJ.1.24716.seq
# -bsequence pep-align/BPUM_1835.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02947___yndJ-BPUM_1835.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02947___yndJ-BPUM_1835.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02947___yndJ
# 2: BPUM_1835
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 555
# Identity: 215/555 (38.7%)
# Similarity: 319/555 (57.5%)
# Gaps: 21/555 ( 3.8%)
# Score: 1018.0
#
#
#=======================================
BSNT_02947___ 1 MQRNGIVSALCFIG-FLAAEAPDISVAEALVLLSILFFVPGIFPFVFRQS 49
|.:..:.|:|.|:. |:|.......:||..|||:||||:|....|..::.
BPUM_1835 1 MNKWHLASSLIFMSYFIATRFMTGLIAEFFVLLAILFFLPTALHFFKKEG 50
BSNT_02947___ 50 PVRAAQFMEYGLIQCYPAAAFFAVLALVTEVGVFALIWWMYTVFIALYAI 99
.....:.:...|::.:|.|:..|..|.:.....||..|.:||:.:||:..
BPUM_1835 51 KKHKEERLIGFLMKAFPLASLCATAAFIYHSAWFASGWILYTILLALFGF 100
BSNT_02947___ 100 LRLWETKIHRIEETSVLFGLIYLAGGGFWFFAYAAHLQIMQFGPLIILLT 149
.||.:..|..:.|..:....:|||.||.||:.|.|.:|:|.|.|:|:|||
BPUM_1835 101 SRLLKRGIFPLHELMIDGAWMYLALGGLWFWLYTADIQVMTFSPIIVLLT 150
BSNT_02947___ 150 AVHFHYSAFLIPIFNGLLGRTIRKHRMLYSWITWVILLSPLLIALGITYS 199
.:|||||||.||:|.|.|||...|...||....|||||||::||:||::|
BPUM_1835 151 VIHFHYSAFFIPLFYGFLGRQQAKETALYKAAGWVILLSPVMIAVGISFS 200
BSNT_02947___ 200 KTLDVIAVSIYMAAIYLHAFLVFTAAFRTKTGTFLIRLSSAVLMITIAFS 249
:..|..:|.:|:.|:|::..|.....||:.....|:..||.|||.||..|
BPUM_1835 201 RLFDTFSVILYVVALYIYGILCMKTRFRSTLAKGLVVFSSLVLMGTIVLS 250
BSNT_02947___ 250 MIYSFGVFRQEVTLTINQMIWIHGFVNAFGVILPALIGWRIEDAKPFDAD 299
::||.|:..:...::|:||||.||.:|||.||||.||||.||. |.|..
BPUM_1835 251 LLYSAGMLMRVTYISIDQMIWFHGSINAFFVILPGLIGWLIEG--PKDQL 298
BSNT_02947___ 300 SVKTF--SRIYGKRKIGEEFLANIQAE--NNARYSGLVDDMGSLRSKDFS 345
..|.| |:::|:.: :.:.|.| :|....||||.:..|....||
BPUM_1835 299 KQKNFPISKVHGRFQ-----MISFQEESVHNPEKLGLVDSLDELNGTTFS 343
BSNT_02947___ 346 PEKLAPLILSFYEQTIEYNIKAKVTWSMWFRPLAIIYEWFSRRIGQIHLS 395
.::::|:|..|||..:.:.:||.|::..|.||...:.:...::|||:.|.
BPUM_1835 344 ADRVSPVIRRFYEDPMAFTLKAAVSFHWWIRPFVFLLQPLFKQIGQLFLG 393
BSNT_02947___ 396 TNPDWYRMYSKIKGVHSKKDGRERVRAWIRTNEKNETIFTALYSVYRSNG 445
.:...|.|..::......|:.|:.||||||.|.|.:.:|.|||:::....
BPUM_1835 394 LSRHPYEMKGRLIRFQHPKEERKSVRAWIRHNVKGKQVFFALYALHHDAA 443
BSNT_02947___ 446 EGYMNISLPLPFSSMTGILKPYHHQEKLVLTSRRRKSRAGDEGIYLQTRA 495
.|||||:||||:|.:|.||:|::.:|..:|.|...|...||||:||.|..
BPUM_1835 444 TGYMNIALPLPYSQLTAILRPFNEKEDFILKSTCPKGSTGDEGLYLHTPF 493
BSNT_02947___ 496 GTCPLPLSETFLIEAAHDNKLTAVHHMWLFGIKFLTVHYSIT----HINQ 541
.|..||:.|:|.::...|..|||||.|.||||.|||:||.|. |::|
BPUM_1835 494 ITMQLPMEESFHMKPETDQSLTAVHQMKLFGIPFLTIHYQIDSESHHVSQ 543
BSNT_02947___ 542 PIERT 546
BPUM_1835 543 ----- 543
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