Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03102 and BPUM_1833

See DNA alignment / Visit BSNT_03102 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_03102___csaA.1.24716.seq
#    -bsequence pep-align/BPUM_1833___csaA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03102___csaA-BPUM_1833___csaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03102___csaA-BPUM_1833___csaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03102___csaA
# 2: BPUM_1833___csaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      81/110 (73.6%)
# Similarity:    91/110 (82.7%)
# Gaps:           0/110 ( 0.0%)
# Score: 403.0
# 
#
#=======================================

BSNT_03102___      1 MAVIEDFEKLDIRTGTIVKAEEFPEARVPAIKLVIDFGTEIGIKQSSAQI     50
                     ||.||.|..||||.|||::||.|.||||||:||.||||.|||:||||||:
BPUM_1833___c      1 MADIEQFLALDIRVGTIIEAEFFAEARVPALKLKIDFGEEIGVKQSSAQL     50

BSNT_03102___     51 TKRYKPEGLINKQVIAVVNFPPRRIAGFKSEVLVLGGIPGQGDVVLLQPD    100
                     ||||..|.|..||::||||||||||||||||||||||:|.:.|||||..|
BPUM_1833___c     51 TKRYTAENLTGKQIVAVVNFPPRRIAGFKSEVLVLGGMPSKEDVVLLATD    100

BSNT_03102___    101 QPVPNGTKIG    110
                     :||.||||||
BPUM_1833___c    101 EPVENGTKIG    110


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