Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02903 and BPUM_1830
See
DNA alignment /
Visit
BSNT_02903 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence pep-align/BSNT_02903___xylR.1.24716.seq
# -bsequence pep-align/BPUM_1830___xylR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02903___xylR-BPUM_1830___xylR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02903___xylR-BPUM_1830___xylR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02903___xylR
# 2: BPUM_1830___xylR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 386
# Identity: 268/386 (69.4%)
# Similarity: 332/386 (86.0%)
# Gaps: 2/386 ( 0.5%)
# Score: 1450.0
#
#
#=======================================
BSNT_02903___ 1 MDIADQTFVKKVNQKLLLKEILKNSPISRAKLSEMTGLNKSTVSSQVNTL 50
||||||.||||:||||||||||:::|||||||||.||||||||||||:||
BPUM_1830___x 1 MDIADQNFVKKINQKLLLKEILQHAPISRAKLSERTGLNKSTVSSQVSTL 50
BSNT_02903___ 51 MKENLVFEIGQGKSSGGRRPVMLVFNKKAGYSVGIDVGVDYINGILTDLE 100
|||.||:|||||:||||||||:|:|||:||.|:||||||||:||||||||
BPUM_1830___x 51 MKEQLVYEIGQGESSGGRRPVLLMFNKRAGCSIGIDVGVDYVNGILTDLE 100
BSNT_02903___ 101 GTIVLDQYCHLESNSPEITKDILIDMIHHFITHMPQSPYGLIGIGICVPG 150
|:|:.::..:|.|::|::|..||.::|...::.:|.|||||||||:|:||
BPUM_1830___x 101 GSILHEEQINLPSSAPDVTIRILTELIQQLMSQIPSSPYGLIGIGLCIPG 150
BSNT_02903___ 151 LIDKDQKIVFTPNSNWRDIDLKSSIQEKYNVPVFIENEANAGAYGEKVFG 200
|:|.||:|||||:|.|:::|||.::|:.:.|||||||||||||||||:||
BPUM_1830___x 151 LVDADQQIVFTPHSKWKNVDLKKALQDAFQVPVFIENEANAGAYGEKIFG 200
BSNT_02903___ 201 AAKNHDNIIYVSISTGIGIGVIINNHLYRGVSGFSGEMGHMTIDFNGPKC 250
|||::|::||.||.||||||:|||:|||||..||||||||||||||||.|
BPUM_1830___x 201 AAKHYDHLIYASIGTGIGIGIIINHHLYRGAYGFSGEMGHMTIDFNGPTC 250
BSNT_02903___ 251 SCGNRGCWELYASEKALLTSLQTKAKKLSYQDIIDLAHLNDIGTLNALQN 300
|||||||||||||||||..||||..|.:|:||:..||.|||:.|||||:|
BPUM_1830___x 251 SCGNRGCWELYASEKALFQSLQTNEKPISHQDVEQLATLNDMKTLNALRN 300
BSNT_02903___ 301 FGFYLGIGLTNILNTFNPQAVILRNSIIESHPMVLNSMRSEVSSRVYSQL 350
||||||:||||:|:||||||:||||.:|||.|.||..::.|||||:.:|.
BPUM_1830___x 301 FGFYLGVGLTNVLHTFNPQAIILRNKVIESQPTVLRVIQEEVSSRIDTQF 350
BSNT_02903___ 351 GNSYELLPSSLGQNAPALGMSSIVIDHFLDMITM-- 384
.:..||||||||.|||.|||:|:||:.||...|:
BPUM_1830___x 351 SSHVELLPSSLGHNAPVLGMTSLVIEAFLQDATLSP 386
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.