Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03058 and BPUM_1823
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence pep-align/BSNT_03058.1.24716.seq
# -bsequence pep-align/BPUM_1823___proJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03058-BPUM_1823___proJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03058-BPUM_1823___proJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03058
# 2: BPUM_1823___proJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 374
# Identity: 152/374 (40.6%)
# Similarity: 186/374 (49.7%)
# Gaps: 128/374 (34.2%)
# Score: 749.0
#
#
#=======================================
BSNT_03058 0 -------------------------------------------------- 0
BPUM_1823___p 1 MYADKERKRIVVKIGSSSLTSFQGEISLKKLENLVNQIVKLKDEGHEVIL 50
BSNT_03058 0 -------------------------------------------------- 0
BPUM_1823___p 51 VSSGAVAAGYRKLGFIDRPKTLPEKQASASIGQGLLMESYSTLFLSHGYI 100
BSNT_03058 1 -----------------------MNVLLERGIIPIINENDTVTVNRLKFG 27
|||||:||||||||||||||:||||||
BPUM_1823___p 101 ASQLLITRSDFSDETRYQNVRNTMNVLLDRGIIPIINENDTVTINRLKFG 150
BSNT_03058 28 DNDTLAAKVAGLIDADMLVILSDIDGLYDGNPRTNPEAKRIQRVSEITPD 77
|||||:||||||||||.|.|||||||||:.||.|||.||||..|::||.|
BPUM_1823___p 151 DNDTLSAKVAGLIDADFLAILSDIDGLYEENPHTNPNAKRILEVTDITED 200
BSNT_03058 78 IEACAGDTGSIVGTGGMRSKLDAFKIVMASGIKGFLGQADAGDILYHAVH 127
|||.|||.||.||||||:||||||||.||:||.||||:||...||..|::
BPUM_1823___p 201 IEAAAGDAGSSVGTGGMKSKLDAFKISMAAGINGFLGKADTPHILDKAIN 250
BSNT_03058 128 EQAEGTYFEAEGTL-PLNQKEKWIAFNSGPEGEMFLSDDCSRKITNGQSS 176
...:||||.|:..| |||.|::||||:|||:||:.:.......:.:.:..
BPUM_1823___p 251 GTEDGTYFTADEILAPLNYKKQWIAFHSGPKGEIVVQKKSQEHLMHREKC 300
BSNT_03058 177 LYLDGVQKIKGKFKSGSVVRLMDSKGTEIGLGIVNYSS--VQLQEPEKKK 224
|..||:..:||.||.|.|||::|....|||||||||.| :.|.....:.
BPUM_1823___p 301 LDSDGIVNVKGSFKKGDVVRILDQDEREIGLGIVNYPSDELALSRDSLQD 350
BSNT_03058 225 ELTNRALIDQEAFVCHVDFSLPVN 248
|:.: ::|.||||||:|.|:||.
BPUM_1823___p 351 EVVH--VVDLEAFVCHLDLSIPVC 372
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