Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03058 and BPUM_1823
See
Amino acid alignment /
Visit
BSNT_03058 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence dna-align/BSNT_03058.1.24716.seq
# -bsequence dna-align/BPUM_1823___proJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03058-BPUM_1823___proJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03058-BPUM_1823___proJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03058
# 2: BPUM_1823___proJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1191
# Identity: 508/1191 (42.7%)
# Similarity: 508/1191 (42.7%)
# Gaps: 516/1191 (43.3%)
# Score: 1447.0
#
#
#=======================================
BSNT_03058 0 -------------------------------------------------- 0
BPUM_1823___p 1 GTGTACGCAGATAAAGAGAGAAAACGAATTGTTGTGAAAATCGGAAGCAG 50
BSNT_03058 0 -------------------------------------------------- 0
BPUM_1823___p 51 CTCTCTTACTAGCTTTCAAGGGGAGATTAGTTTAAAAAAACTAGAAAACC 100
BSNT_03058 0 -------------------------------------------------- 0
BPUM_1823___p 101 TCGTCAATCAAATTGTGAAACTCAAAGATGAAGGACATGAAGTCATTTTG 150
BSNT_03058 0 -------------------------------------------------- 0
BPUM_1823___p 151 GTTTCATCTGGTGCGGTTGCAGCTGGTTACCGAAAACTAGGATTTATCGA 200
BSNT_03058 0 -------------------------------------------------- 0
BPUM_1823___p 201 TAGACCCAAAACACTGCCGGAAAAACAGGCATCTGCCTCGATAGGGCAAG 250
BSNT_03058 0 -------------------------------------------------- 0
BPUM_1823___p 251 GGCTTTTAATGGAATCATATTCTACTTTATTTTTATCACACGGTTATATT 300
BSNT_03058 0 -------------------------------------------------- 0
BPUM_1823___p 301 GCTTCACAGCTTTTAATCACAAGAAGTGATTTTTCAGATGAAACGCGCTA 350
BSNT_03058 1 -------------------ATGAATGTACTGCTCGAGCGCGGCATCATCC 31
||||||||..|..|.||.||.||||||||.|
BPUM_1823___p 351 TCAAAATGTGCGGAACACAATGAATGTGTTATTAGATCGAGGCATCATTC 400
BSNT_03058 32 CGATCATAAACGAAAATGACACAGTTACCGTCAATCGGCTCAAGTTTGGC 81
||||.||.||.||||||||.|||||.||..|.|||||..|.|||||.||.
BPUM_1823___p 401 CGATTATCAATGAAAATGATACAGTGACGATTAATCGCTTGAAGTTCGGA 450
BSNT_03058 82 GACAATGATACACTCGCGGCAAAAGTCGCAGGATTGATTGATGCAGATAT 131
||.||.||||||.|..|.||||||||.||.|||.|.||||||||.|||.|
BPUM_1823___p 451 GATAACGATACATTGTCTGCAAAAGTAGCTGGACTCATTGATGCGGATTT 500
BSNT_03058 132 GCTTGTGATTTTATCAGATATAGACGGATTATATGACGGCAATCCGCGCA 181
.||||..||||||||.|||||.||.||..|.|||||.|..||.||||..|
BPUM_1823___p 501 CCTTGCCATTTTATCTGATATTGATGGCCTGTATGAAGAGAACCCGCATA 550
BSNT_03058 182 CAAATCCAGAA-GCGAAAAGGATACAGCGGGTG-AGT----GAAATAACA 225
||||||| ||| ||||||||.||.| .|| ||| ||.||.|||
BPUM_1823___p 551 CAAATCC-GAATGCGAAAAGAATCC-----TTGAAGTCACAGACATCACA 594
BSNT_03058 226 CCTGACATCGAAGCATGC-GCAGGTGACACTGGAAGCATCGTTGGCACCG 274
...|||||||||||| || ||.||.||..|.||.||||..||.|||||.|
BPUM_1823___p 595 GAAGACATCGAAGCA-GCAGCTGGAGATGCAGGTAGCAGTGTGGGCACAG 643
BSNT_03058 275 GCGGCATGCGCTCTAAGCTTGATGCGTTTAAAATCGTAATGGCGTCTGGC 324
||||.|||...||.|||||.||||||||||||||...||||||..||||.
BPUM_1823___p 644 GCGGAATGAAATCAAAGCTCGATGCGTTTAAAATTTCAATGGCTGCTGGT 693
BSNT_03058 325 ATTAAAGGTTTCCTTGGTCAGGCAGAT--GCCGGCGATATTTTATATCAC 372
||.||.||.||..|.||..|.||.||| ||| ..|.||||||.|..|.
BPUM_1823___p 694 ATCAATGGCTTTTTAGGCAAAGCGGATACGCC--TCACATTTTAGACAAA 741
BSNT_03058 373 GC------CGTTCATGAACAGGCGGAAGGCACCTATTTTGAAGCAGAAGG 416
|| || ||||| |.|||.|||||.||||||...||.| |.|
BPUM_1823___p 742 GCAATCAACG-----GAACA-GAGGATGGCACTTATTTTACCGCTG-ATG 784
BSNT_03058 417 AACGCTT----CCGTTGAATCAAAAGGAGAAATGGATCGCTTTTAATTCC 462
||..||| |||.|||||.|.|||.||.|.|||||.||.|||.||||.
BPUM_1823___p 785 AAATCTTAGCACCGCTGAATTACAAGAAGCAGTGGATTGCCTTTCATTCT 834
BSNT_03058 463 GGCCCGGAAGGTGAAATGTTTTTATCAGATGATTGTTCACGAAAAATAAC 512
||.||..||||.| ||||..||||.||..|.||||.||
BPUM_1823___p 835 GGACCAAAAGGCG-------------AGATCGTTGTGCAAAAGAAATCAC 871
BSNT_03058 513 A--AACGGCCAATCGAGTTTAT--ACCTGGACGGTGTACAGAA------- 551
| ||| ||| |||| |||.|| ||||
BPUM_1823___p 872 AGGAAC-----ATC----TTATGCACCGGG---------AGAAATGCTTG 903
BSNT_03058 552 GAT--TAAGGGGA-----AATTCAAAAGTGGTTCAGTTGTT------CGG 588
||| |.|.|||| |||..|||| ||||| ||| .||
BPUM_1823___p 904 GATTCTGATGGGATTGTCAATGTAAAA--GGTTC----GTTTAAAAAAGG 947
BSNT_03058 589 CTGATG--------------GATTCAAAAGGGACG-GAAATCGGCCTTGG 623
| |||| || ||||.|.|.|.| ||||||||.|||||
BPUM_1823___p 948 C-GATGTCGTCCGTATTTTAGA-TCAAGATGAAAGAGAAATCGGGCTTGG 995
BSNT_03058 624 AATCGTCAATTACTCTTCTGTACAGCTTCAAGAACCGGAA--AA------ 665
.||.||.|||||..|.|||| |.||||.||.| ||
BPUM_1823___p 996 TATTGTGAATTATCCATCTG---------ACGAACTGGCACTAAGCCGTG 1036
BSNT_03058 666 ----GAAAAAGGAACTGACAAACAGAGCTCTAA-----TTGATCAAGAAG 706
|..|.|||| ||| ||.|.| |.| |.||||..||||
BPUM_1823___p 1037 ATTCGTTACAGGA--TGA-----AGTGGT-TCATGTCGTCGATCTTGAAG 1078
BSNT_03058 707 CATTTGTTTGCCATGTGGATTTTTCTTTACCTGTAAATTAA 747
|.||||||||.|||.|.|||||.||..||||.||....|||
BPUM_1823___p 1079 CTTTTGTTTGTCATTTAGATTTATCGATACCAGTTTGCTAA 1119
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.