Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03865 and BPUM_1818

See DNA alignment / Visit BSNT_03865 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:23
# Commandline: needle
#    -asequence pep-align/BSNT_03865___bltR.1.24716.seq
#    -bsequence pep-align/BPUM_1818___bltR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03865___bltR-BPUM_1818___bltR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03865___bltR-BPUM_1818___bltR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03865___bltR
# 2: BPUM_1818___bltR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:      82/278 (29.5%)
# Similarity:   144/278 (51.8%)
# Gaps:          10/278 ( 3.6%)
# Score: 342.5
# 
#
#=======================================

BSNT_03865___      1 MSEDVKKYFTTGEFSKLCRVKKQTLFHYDEIGLFSPEIKKENGYRYYSYH     50
                     |..||:|.|.||||:||..|||.|||:||:|.||.|....|||||||:..
BPUM_1818___b      1 MINDVQKTFFTGEFAKLFDVKKDTLFYYDKIDLFKPAGVHENGYRYYTLE     50

BSNT_03865___     51 QFEIFQVISLFKELGVPLKEIKCLIKGKTPDKILHVLKEKSIEIDKKINE    100
                     ||:.|..|...:.:..|:||:|......:.:::..:..|:..::.::|.:
BPUM_1818___b     51 QFDHFIAIQSLRAVQFPIKELKQYFTEPSRERLQSLATEQIEKVKQEIEK    100

BSNT_03865___    101 LKQLQTILQTKVTLTEQALETDFSSISFEYLNEETFMLSRKTLNLPERKY    150
                     |:.:|:.|...|..|.:........:.|:.|.||..:||... .:.....
BPUM_1818___b    101 LQDIQSFLMRVVETTHELSTVKIGEVLFQELPEEPVVLSASN-PIDMNTS    149

BSNT_03865___    151 VAAISELI-HEVQQYELDEGYPIGGIFAREQILEKDFYNYSYFYIKVKDG    199
                     |..||.:: |.:::..:......|.:..:||.|::.::.....:.:: :.
BPUM_1818___b    150 VEEISRIVGHFLKEIGIKGAAANGAVLKKEQFLQRQYHQSDQLFCRM-EA    198

BSNT_03865___    200 AENINYHVRPKGLYAVGYEIGG--NTEEAYRRIIEFIERNGMQIGENAYE    247
                     .|.:.   :|.|||||.|:.|.  ..|.||.|:::.||:..|.:..:.:|
BPUM_1818___b    199 PEAVK---KPAGLYAVMYDQGSYEEIESAYSRLLDEIEKEDMILDGDVFE    245

BSNT_03865___    248 EYMLDEMVVDGYENTYAKILLQVKEV--    273
                     ||:|..::.........|:.::||:.  
BPUM_1818___b    246 EYLLHSLMSKDEAEYITKLSVKVKKHLD    273


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