Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01367 and BPUM_1817
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence pep-align/BSNT_01367___yfiC.1.24716.seq
# -bsequence pep-align/BPUM_1817___yfiC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01367___yfiC-BPUM_1817___yfiC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01367___yfiC-BPUM_1817___yfiC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01367___yfiC
# 2: BPUM_1817___yfiC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 614
# Identity: 265/614 (43.2%)
# Similarity: 389/614 (63.4%)
# Gaps: 19/614 ( 3.1%)
# Score: 1284.0
#
#
#=======================================
BSNT_01367___ 1 MLKDIRKPFQYPKLPIDKKEGAKKRAKAKDTKGTLRRIWSYLAERKGLLV 50
|...:.....:|:.|: ||.|:.|.||.|:..||..||..|:
BPUM_1817___y 1 MSSGMGHKGGHPRGPV---------AKPKEFKKTLIRLIGYLKPRKFQLI 41
BSNT_01367___ 51 LVMLMVVISAIFGLLGPFVIGKA----IDHFIVGKTV--SGLIPVLLLLL 94
||.:..|.|.:|.::.|.::|.| .|.|..|..| ..:..:||||:
BPUM_1817___y 42 LVFIAAVGSTVFNVISPKLLGDATSSLFDSFTQGTAVQFDVISRILLLLI 91
BSNT_01367___ 95 AIYIIQSLSLWFQNYWMITISQGTVFRMRSELFTHLHELPIPFFDKQRHG 144
.:|::.||..:.|.|.|..:||.|:..:|.|....|..||:.:|||..||
BPUM_1817___y 92 LLYVVASLFSFVQQYVMAGVSQQTIAELRQEANDKLTRLPLRYFDKTTHG 141
BSNT_01367___ 145 ELMSRVTNDIENVSSTLNTSVIQILSSVITFAGTIAVMLYMSPLLTLITL 194
:.:|||.|||:|::::|..::.|:::||||..|.:.:||::||||||:..
BPUM_1817___y 142 DTLSRVMNDIDNINTSLQQALTQVITSVITVIGIVVMMLFISPLLTLLVC 191
BSNT_01367___ 195 TIIPVMAASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIKAYSR 244
..:|:...:::.||:.:.|.||.|||.||.:||:|.|..:|.:.::||..
BPUM_1817___y 192 LTLPLSLFAIRGITSFSQKHFKAQQKELGMINGHINEMFTGHQTVRAYGY 241
BSNT_01367___ 245 EKQITAEFLEKNAALKTSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGL 294
||:....|.:.|..|..|...||.|||.:..:|..:.||.:..::..||:
BPUM_1817___y 242 EKKAIDTFDQLNEQLYESSRKAQFISGLMMPLMTFIGNLGYVAVSVAGGI 291
BSNT_01367___ 295 FALKGWISIGSIVVFAEYSRQFTRPLNDLANQFNTMLSAIAGAERVFAVL 344
..:.|.|.:|.:..|.:|::|.::||...::..|.:.||||.|||||.:|
BPUM_1817___y 292 LVINGNIRVGDVQAFIQYTQQMSQPLVQASSVANLVQSAIASAERVFDIL 341
BSNT_01367___ 345 DEKEERDDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQS 394
||:||..:|..|:.....:|.:.|..|.|||:|....:|:|...|..||:
BPUM_1817___y 342 DEEEENAEEDAAIDLESLSGDVSFEQVQFGYEKDHPIIKNLSLDVKEGQT 391
BSNT_01367___ 395 IAFVGPTGAGKTTVTNLLARFYEPDEGKILIDGTDIKTLTRASLRKNMGF 444
:|.||||||||||:.|||.||||.|:|.|.|.|.....|:|..:|.....
BPUM_1817___y 392 VAIVGPTGAGKTTIINLLMRFYELDQGSIRIGGVKTTDLSRQQVRDLFAM 441
BSNT_01367___ 445 VLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTANAHSFIERLPKGYDT 494
||||::||:|||.:||.|||.:.|.::|..|||.|.|..||..||.||||
BPUM_1817___y 442 VLQDTWLFEGTIHDNIAYGRQNVSKEDVIKAAKHAYADDFIRTLPDGYDT 491
BSNT_01367___ 495 VLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEA 544
:||::...:||||:||::||||:|:||.:||||||||::||.||::||:|
BPUM_1817___y 492 LLTEDAGNLSQGQRQLLTIARAILSDPKILILDEATSSVDTRTEMHIQKA 541
BSNT_01367___ 545 LARLMEGRTSVIIAHRLNTIQRADQIVVLKDGEMIEKGSHDELIQQKGFY 594
:..||.||||.:|||||:||:.||.|:|:|||.:||||:|.||::|.|||
BPUM_1817___y 542 MNELMNGRTSFVIAHRLSTIKDADLILVMKDGTIIEKGTHSELLKQNGFY 591
BSNT_01367___ 595 SDLYESQFEK---- 604
:|||.|||.:
BPUM_1817___y 592 ADLYMSQFTENQVG 605
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