Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03056 and BPUM_1815

See DNA alignment / Visit BSNT_03056 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence pep-align/BSNT_03056___gltC.1.24716.seq
#    -bsequence pep-align/BPUM_1815___gltC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03056___gltC-BPUM_1815___gltC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03056___gltC-BPUM_1815___gltC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03056___gltC
# 2: BPUM_1815___gltC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     235/300 (78.3%)
# Similarity:   272/300 (90.7%)
# Gaps:           0/300 ( 0.0%)
# Score: 1235.0
# 
#
#=======================================

BSNT_03056___      1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFER     50
                     |||||||||:|||:||||||||::|||||||||||||||||||.|.||||
BPUM_1815___g      1 MELRQLRYFVEVADREHVSEAAENLHVAQSAISRQIANLEEELGVALFER     50

BSNT_03056___     51 EGRNIKLTPIGKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTS    100
                     ||||||||.||::||.||:||:|||||||||||||||||:|||.||||||
BPUM_1815___g     51 EGRNIKLTKIGRQFLDHVRTALKAIDYAKEQIDEYLDPHKGTVNIGFPTS    100

BSNT_03056___    101 LASQLLPTVISAFKEEYPHVEFLLRQGSYKFLIEAVRNRDIDLALLGPVP    150
                     ||||:||:||||||:|||.|:|||||||||||||||:|||||||.|||||
BPUM_1815___g    101 LASQVLPSVISAFKQEYPEVDFLLRQGSYKFLIEAVKNRDIDLAFLGPVP    150

BSNT_03056___    151 TNFSDITGKILFTEKIYALVPLNHPLAKQKTVHLIDLRNDQFVLFPEGFV    200
                     ||...|.|.|||:|.||||:|::||.:.|:::||.|||.|.|||||||:|
BPUM_1815___g    151 TNDPQIEGNILFSESIYALLPVSHPFSGQRSIHLSDLRKDHFVLFPEGYV    200

BSNT_03056___    201 LREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSAGMGVTLLPESTFAETT    250
                     ||::|:|.|||||:.|.:|:||||||||||||||||||||||||.|.|||
BPUM_1815___g    201 LRQIAVDACKQAGYEPTISSEGEDLDAIKGLVSAGMGVTLLPESAFYETT    250

BSNT_03056___    251 PRFTVKIPIEFPQVKRTVGIIKPKNRELAPSANDFYEFVIQFFSKLEQYQ    300
                     |||||||||:||||:||||||..|:||::|||:|||.||..||||:|||:
BPUM_1815___g    251 PRFTVKIPIDFPQVRRTVGIIASKSREMSPSAHDFYVFVKDFFSKIEQYK    300


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