Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03056 and BPUM_1815
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence dna-align/BSNT_03056___gltC.1.24716.seq
# -bsequence dna-align/BPUM_1815___gltC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03056___gltC-BPUM_1815___gltC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03056___gltC-BPUM_1815___gltC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03056___gltC
# 2: BPUM_1815___gltC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 922
# Identity: 666/922 (72.2%)
# Similarity: 666/922 (72.2%)
# Gaps: 38/922 ( 4.1%)
# Score: 2296.5
#
#
#=======================================
BSNT_03056___ 1 ATGGAGCTGCGCCAACTGCGTTATTTCATGGAGGTGGCTGAAAGAGAACA 50
||||||||.||.|||.||||||||||..|.||.||.||.||..|.|||||
BPUM_1815___g 1 ATGGAGCTTCGTCAATTGCGTTATTTTGTAGAAGTCGCAGACCGTGAACA 50
BSNT_03056___ 51 CGTTTCAGAAGCCGCTGATCATTTGCATGTGGCCCAATCAGCAATCAGCA 100
|||.||||||||.|||||..|.||.|||||.||||||||.||.|||||..
BPUM_1815___g 51 CGTGTCAGAAGCGGCTGAAAACTTACATGTTGCCCAATCTGCGATCAGTC 100
BSNT_03056___ 101 GACAAATTGCTAATCTTGAAGAAGAA-TTAAATGTGACCTTATTTGAGCG 149
|.||.|||||.|||.|.||||||||| ||..| |||.|||||||.||.||
BPUM_1815___g 101 GGCAGATTGCGAATTTAGAAGAAGAACTTGGA-GTGGCCTTATTCGAACG 149
BSNT_03056___ 150 TGAAGGGAGAAATATCAAACTCACGCCAATCGGAAAAGAATTTTT-GATT 198
.|||||..|||||||||||.|.|||...||.||.|...||||||| || |
BPUM_1815___g 150 AGAAGGACGAAATATCAAATTAACGAAGATTGGCAGGCAATTTTTAGA-T 198
BSNT_03056___ 199 CATGTGAAAACGGCGATGAAAGCCATTGATTATGCGAAAGAGCAAATTGA 248
|||||.|.|||.||..|.||||||||||||||||||||||||||||||||
BPUM_1815___g 199 CATGTCAGAACAGCACTCAAAGCCATTGATTATGCGAAAGAGCAAATTGA 248
BSNT_03056___ 249 TGAGTATCTTGACCCGCATCGCGGAACGGTAAAGATCGGCTTTCCTACAA 298
|||.|||.|.||.|||||....|||||.||.||.||.|||||||||||.|
BPUM_1815___g 249 TGAATATTTAGATCCGCACAAAGGAACTGTCAATATTGGCTTTCCTACTA 298
BSNT_03056___ 299 GCCTCGCCAGCCAGCTTTTGCCGACTGTCATTTCAGCGTTTAAAGAAGAA 348
||||.||.|||||..|..|.||..||||||||||.||.|||||..|.|||
BPUM_1815___g 299 GCCTAGCAAGCCAAGTGCTACCTTCTGTCATTTCCGCCTTTAAGCAGGAA 348
BSNT_03056___ 349 TATCCGCACGTCGAATTTTTGCTGCGCCAAGGCTCCTATAAGTTTCTGAT 398
||.||..|.|||||.|||||.||.||.|||||.||||||||.|||||.||
BPUM_1815___g 349 TACCCAGAGGTCGATTTTTTACTTCGTCAAGGATCCTATAAATTTCTCAT 398
BSNT_03056___ 399 TGAAGCTGTCAGAAACCGCGATATTGATCTGGCCTTATTAGGACCGGTGC 448
|||||||||.|.|||.||.|||||||||||.|||||.||||||||.||.|
BPUM_1815___g 399 TGAAGCTGTAAAAAATCGAGATATTGATCTCGCCTTTTTAGGACCTGTAC 448
BSNT_03056___ 449 CGACGAATTTCTCTGACATAACGGGAAAAATATTATTTACTGAAAAAATT 498
||||.||...|.||.|.|||...|||||.||.||.|||.|.||||..|||
BPUM_1815___g 449 CGACAAACGACCCTCAAATAGAAGGAAATATTTTGTTTTCAGAAAGCATT 498
BSNT_03056___ 499 TACGCGCTTG-TTCCATTAAATCATCCGCTTGCTA---AACAAAAAACGG 544
||.|| |||| |.||..|.|..|| ||.||| || .||||| ||
BPUM_1815___g 499 TATGC-CTTGCTGCCTGTCAGCCA-CCCCTT--TAGCGGACAAA----GG 540
BSNT_03056___ 545 ----TTCATTTAATCGATTTGCGCAACGACCAATTTGTATTGTTCCCGGA 590
|||||||||..|||||..|.||.||.||.||.|||||.||.|||||
BPUM_1815___g 541 AGTATTCATTTAAGTGATTTAAGAAAAGATCATTTCGTATTATTTCCGGA 590
BSNT_03056___ 591 AGGATTTGTACTTAGAGAGATGGCAATTGATACTTGCAAACAAGCAGGCT 640
|||||.|||.||.|||.|.||.||..|.|||.||||.||.||.|||||||
BPUM_1815___g 591 AGGATATGTGCTGAGACAAATTGCGGTAGATGCTTGTAAGCAGGCAGGCT 640
BSNT_03056___ 641 TTGCTCCTCTCGTTTCCACGGAGGGTGAGGATTTGGATGCTATCAAAGGG 690
.||..||...|.||||..|.|||||.||.|||||.||.||.||.|||||.
BPUM_1815___g 641 ATGAACCAACCATTTCATCAGAGGGAGAAGATTTAGACGCCATTAAAGGT 690
BSNT_03056___ 691 TTAGTGTCCGCAGGGATGGGCGTTACCCTTCTGCCTGAAAGTACTTTTGC 740
.|.||.||.||.||.||||||||||||.|..|.||.||||||.|||||..
BPUM_1815___g 691 CTCGTATCAGCGGGTATGGGCGTTACCTTATTACCCGAAAGTGCTTTTTA 740
BSNT_03056___ 741 TGAAACAACACCTCGTTTTACTGTGAAAATTCCAATTGAGTTCCCTCAAG 790
||||||.|||||.||.|||||.|||||||||||.||.||.||.||.||.|
BPUM_1815___g 741 TGAAACCACACCGCGATTTACAGTGAAAATTCCGATCGATTTTCCGCAGG 790
BSNT_03056___ 791 TAAAACGGACTGTCGGAATCAT------TAAA--CCGAAAAATAGAGAGC 832
|.|.|.|.||.||.||.||.|| |||| .|||.|||
BPUM_1815___g 791 TGAGAAGAACCGTTGGCATTATTGCTTCTAAATCACGAGAAA-------- 832
BSNT_03056___ 833 TTG-CGCCTTCTGCGAATGATTTTTATGAGTTTGTCATTCAATTTTTCTC 881
|| |.||.||.||..||||||||||||.||||||.|...|.||.||.||
BPUM_1815___g 833 -TGTCTCCATCCGCTCATGATTTTTATGTGTTTGTGAAGGATTTCTTTTC 881
BSNT_03056___ 882 TAAGTTGGAGCAGTATCAATAA 903
|||..|.||.||.|||.|||||
BPUM_1815___g 882 TAAAATCGAACAATATAAATAA 903
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