Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03054 and BPUM_1813

See DNA alignment / Visit BSNT_03054 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:34
# Commandline: needle
#    -asequence pep-align/BSNT_03054___gltD.1.24716.seq
#    -bsequence pep-align/BPUM_1813___gltD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03054___gltD-BPUM_1813___gltD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03054___gltD-BPUM_1813___gltD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03054___gltD
# 2: BPUM_1813___gltD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 494
# Identity:     425/494 (86.0%)
# Similarity:   457/494 (92.5%)
# Gaps:           1/494 ( 0.2%)
# Score: 2296.0
# 
#
#=======================================

BSNT_03054___      1 MGKPTGFMEIKREKPAERDPLTRLKDWKEYSAPFSEEASKRQGARCMDCG     50
                     |||.||||:.|||||.|||||||..||||||||::.:..|:|||||||||
BPUM_1813___g      1 MGKATGFMDYKREKPNERDPLTRQNDWKEYSAPYTNDVLKKQGARCMDCG     50

BSNT_03054___     51 TPFCQIGADINGFTSGCPIYNLIPEWNDLVYRGRWKEALERLLKTNNFPE    100
                     |||||||.:|.|..||||||||||||||||||||||||||||.|||||||
BPUM_1813___g     51 TPFCQIGMEIRGGVSGCPIYNLIPEWNDLVYRGRWKEALERLQKTNNFPE    100

BSNT_03054___    101 FTGRVCPAPCEGSCTLAISDPAVSIKNIERTIIDKGFENGWIQPRIPKKR    150
                     |||||||||||||||:||:|||||||||||||||||||||||.||||..|
BPUM_1813___g    101 FTGRVCPAPCEGSCTVAINDPAVSIKNIERTIIDKGFENGWITPRIPSSR    150

BSNT_03054___    151 TGKKVAIVGSGPAGLASADQLNQAGHSVTVFERSDRAGGLLTYGIPNMKL    200
                     ||||:|||||||||||||||||||||:|||||||||.|||||||||||||
BPUM_1813___g    151 TGKKIAIVGSGPAGLASADQLNQAGHAVTVFERSDRLGGLLTYGIPNMKL    200

BSNT_03054___    201 EKGIVERRIKLLTQEGIDFVTNTEIGVDITADELKEQFDAVILCTGAQKQ    250
                     :|.:||||:|||.|||||||||||||||:|||||||||||||||||||||
BPUM_1813___g    201 DKEVVERRVKLLRQEGIDFVTNTEIGVDVTADELKEQFDAVILCTGAQKQ    250

BSNT_03054___    251 RDLLIEGRDSKGVHYAMDYLTLATKSYLDSNFKDKQFIDAKGKDVIVIGG    300
                     ||||||||::||:|.|||||||||||.|||.||||.||||||||||||||
BPUM_1813___g    251 RDLLIEGREAKGIHLAMDYLTLATKSMLDSGFKDKNFIDAKGKDVIVIGG    300

BSNT_03054___    301 GDTGADCVATALRQKAKSVHQFGKHPKLPPARTNDNMWPEQPHVFTLEYA    350
                     |||||||||||||||||||.|||||||||..|..||||||||:||:|:||
BPUM_1813___g    301 GDTGADCVATALRQKAKSVVQFGKHPKLPDTRVGDNMWPEQPYVFSLDYA    350

BSNT_03054___    351 YEEAEAKFGRDPREYSIQTTKMVADKNGKLKELHTIQMEKVKNEHGKYEF    400
                     ||||:||||.|||:|||||||:||||||||||||||||||:||||||:||
BPUM_1813___g    351 YEEAQAKFGEDPRQYSIQTTKIVADKNGKLKELHTIQMEKMKNEHGKFEF    400

BSNT_03054___    401 RELPGTEKVWPAQLVFIAIGFEGTEQPLLKQFGVDSVNNKISAAYGDYQT    450
                     .|:|||||||||||||||||||||||||:|.|||||.||:|.|.||:|.|
BPUM_1813___g    401 HEIPGTEKVWPAQLVFIAIGFEGTEQPLVKHFGVDSKNNRIDAKYGEYTT    450

BSNT_03054___    451 NIDGVFAAGDARRGQSLIVWAINEGREVAREVDRYLMGSSVLP-    493
                     |::|||||||||||||||||||||||:||.||||||||||||| 
BPUM_1813___g    451 NVEGVFAAGDARRGQSLIVWAINEGRQVAHEVDRYLMGSSVLPK    494


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