Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03054 and BPUM_1813
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:34
# Commandline: needle
# -asequence dna-align/BSNT_03054___gltD.1.24716.seq
# -bsequence dna-align/BPUM_1813___gltD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03054___gltD-BPUM_1813___gltD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03054___gltD-BPUM_1813___gltD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03054___gltD
# 2: BPUM_1813___gltD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1512
# Identity: 1129/1512 (74.7%)
# Similarity: 1129/1512 (74.7%)
# Gaps: 57/1512 ( 3.8%)
# Score: 4076.5
#
#
#=======================================
BSNT_03054___ 1 ATGGGGAAACCAACTGGATTTATGGA-GATCAAACGAGAAAAACCTGCGG 49
|||||.|||.||||.||.|||||||| .|| |||.|||||||.||....|
BPUM_1813___g 1 ATGGGCAAAGCAACAGGTTTTATGGATTAT-AAAAGAGAAAAGCCAAATG 49
BSNT_03054___ 50 AGCGGGACCCTCTCACTCGCTTAAAGGATTGGAAAGAATATTCTGCTCCT 99
|.||.||||||||||||||...|||.||.||||||||||||||.||||||
BPUM_1813___g 50 AACGTGACCCTCTCACTCGTCAAAATGACTGGAAAGAATATTCAGCTCCT 99
BSNT_03054___ 100 TTTTCAGAAGAAGCATCGAAACGGCAAGGGGCGC--GGTGCATGGATTGC 147
|.|.||.|.||.|.||.|||...||| |||||| |.||.|||||||||
BPUM_1813___g 100 TATACAAATGACGTATTGAAGAAGCA--GGGCGCTAGATGTATGGATTGC 147
BSNT_03054___ 148 GGTACACCGTTTTGCCAGATCGGTGCGGACATTAACGGATTTACATCCGG 197
||.|||||||||||.||.|||||...|||.||.|..||...|...||.||
BPUM_1813___g 148 GGCACACCGTTTTGTCAAATCGGAATGGAGATCAGGGGCGGTGTGTCAGG 197
BSNT_03054___ 198 CTGTCCGATTTACAACTTAATTCCTGAATGGAATGATCTTGTCTACCGGG 247
|||.|||||.||.||.||||||||||||||||||||.|||||.||.||.|
BPUM_1813___g 198 CTGCCCGATCTATAATTTAATTCCTGAATGGAATGACCTTGTGTATCGCG 247
BSNT_03054___ 248 GCAGATGGAAGGAAGCATTGGAACGCCTGTTGAAAACAAACAACTTTCCT 297
|.||||||||.|||||..|.|||.|.|||...||||||||.||.||.|||
BPUM_1813___g 248 GAAGATGGAAAGAAGCGCTCGAAAGACTGCAAAAAACAAATAATTTCCCT 297
BSNT_03054___ 298 GAATTCACAGGGCGGGTATGTCCCGCTCCTTGTGAAGGATCATGCACTTT 347
|||||.||.|||.|.||||||||.||||||||.|||||||||||.||
BPUM_1813___g 298 GAATTTACTGGGAGAGTATGTCCAGCTCCTTGCGAAGGATCATGTAC--- 344
BSNT_03054___ 348 AG-CGATTTCA--GACCCGGCCGTATCAATTAAAAACATCGAGCGGACCA 394
|| ||.|.||| ||.||.||.||.||.||||||||.|||||.||.||.|
BPUM_1813___g 345 AGTCGCTATCAATGATCCAGCTGTTTCGATTAAAAATATCGAACGCACGA 394
BSNT_03054___ 395 TTATCGATAAAGGATTTGAGAACGGCTGGATTCA-ACCTAGAATTCCAAA 443
|.||.||||||||.|||||.||.||||||| ||| |||..|||||||...
BPUM_1813___g 395 TCATTGATAAAGGCTTTGAAAATGGCTGGA-TCACACCGCGAATTCCTTC 443
BSNT_03054___ 444 AAAACGAACAGGCAAAAAAGTTGCTATCGTCGGGTCGGGCCCAGCCGGAC 493
||..||.||||||||||||.||||.||.|||||.||.||.|||||.||||
BPUM_1813___g 444 AAGCCGTACAGGCAAAAAAATTGCCATTGTCGGCTCAGGACCAGCAGGAC 493
BSNT_03054___ 494 TGGCGAGTGCTGACCAGCTGAATCAAGCGGGGCATTCTGTCACTGTTTTT 543
|.||.|||||.||.||..|.||.|||||.||.|||.|.||.||.||.|||
BPUM_1813___g 494 TTGCAAGTGCGGATCAATTAAACCAAGCAGGTCATGCCGTTACCGTGTTT 543
BSNT_03054___ 544 GAGCGCTCAGACAGAGCG----GGCGGCCTTTTAACATACGGCATTCCAA 589
||.||.||.||| || |||||.||..|.||||||||||||||||
BPUM_1813___g 544 GAACGATCTGAC----CGCCTTGGCGGACTGCTGACATACGGCATTCCAA 589
BSNT_03054___ 590 ACATGAAGCTTG----AGAAGGGCATTGTAGAACGCCGAATTAAATTGCT 635
||||||||||.| ||||| |.||.||.||..||.|.|||.||.|
BPUM_1813___g 590 ACATGAAGCTGGACAAAGAAG----TCGTGGAGCGAAGAGTCAAACTGTT 635
BSNT_03054___ 636 GACGCAAGAGGGAATTGATTTTGTCACGAACACAGAAATCGGTGTTGACA 685
||..|||||.||.|||||.|||||.||.||||||||||||||.||.||..
BPUM_1813___g 636 GAGACAAGAAGGCATTGACTTTGTGACAAACACAGAAATCGGCGTAGATG 685
BSNT_03054___ 686 TTACAGCTGATGAGCTAAAGGAGCAATTTGATGCTGTGATCTTATGCACA 735
|.||.||.|||||.||.||.||.||.||||||||.||.|||.|.||.|||
BPUM_1813___g 686 TCACTGCCGATGAACTGAAAGAACAGTTTGATGCGGTCATCCTTTGTACA 735
BSNT_03054___ 736 GGCGCTCAAAAACAGCGGGACCTCTTAATTGAAGGACGCGA--CTCAAAA 783
||.||.|||||.|||||.|||||.||.||||||||.||.|| || |||.
BPUM_1813___g 736 GGTGCACAAAAGCAGCGTGACCTGTTGATTGAAGGCCGTGAAGCT-AAAG 784
BSNT_03054___ 784 GGAGTC-CATTACGCAATGGACTACCTCACACTTGCAACAAAAAGCTAT- 831
|||.|| |.|| ||.|||||.||..|.||.||.|||||||||||| ||
BPUM_1813___g 785 GGATTCACCTT--GCGATGGATTATTTAACCCTCGCAACAAAAAGC-ATG 831
BSNT_03054___ 832 TTAGATTCTAATTTTAAAGACAAGCAATTCATTGATGCCAAAGGGAAAGA 881
.|.|||||....|||||||||||..|.||.||||||||.|||||.|||||
BPUM_1813___g 832 CTGGATTCAGGATTTAAAGACAAAAACTTTATTGATGCAAAAGGAAAAGA 881
BSNT_03054___ 882 TGTCATCGTAATCGGAGGCGGAGATACAGGAGCTGACTGTGTGGCTACCG 931
.||.||.||.||.||.||.|||||||||||.||.||.||.||.||.||.|
BPUM_1813___g 882 CGTTATTGTCATTGGCGGAGGAGATACAGGTGCAGATTGCGTTGCAACTG 931
BSNT_03054___ 932 CTCTGCGTCAAAAAGCCAAAAGCGTGCACCAATTCGGCAAACACCCGAAA 981
|.||.||.||||||||.|||||.||....||.|||||.||.||.|||||.
BPUM_1813___g 932 CCCTTCGCCAAAAAGCAAAAAGTGTTGTTCAGTTCGGGAAGCATCCGAAG 981
BSNT_03054___ 982 CTTCC-GCCAGCCCGCACGAAT----GACAATATGTGGCCTGAACAGCCA 1026
||||| |..| ||||..| ||.||.|||||||||||||||||.
BPUM_1813___g 982 CTTCCAGATA-----CACGTGTAGGGGATAACATGTGGCCTGAACAGCCT 1026
BSNT_03054___ 1027 CACGTCTTTACGCTTGAATATGCATACGAGGAAGCAGAAGCAAAATTCGG 1076
.|||||||..|.||.||.|||||.||.||.|||||..||||.||||||||
BPUM_1813___g 1027 TACGTCTTCTCACTCGATTATGCTTATGAAGAAGCTCAAGCGAAATTCGG 1076
BSNT_03054___ 1077 AAGAGATCCGAGAGAATACTCCATTCAAACGACAAAAATGGTCGCGGATA 1126
...|||||||.|..||||.|||||||||||.||||||||.||.||.||||
BPUM_1813___g 1077 GGAAGATCCGCGTCAATATTCCATTCAAACCACAAAAATAGTGGCAGATA 1126
BSNT_03054___ 1127 AAAACGGAAAGCTGAAAGAGCTTCATACCATCCAAATGGAAAAAGTGAAA 1176
||||.|||||..|.||||||||||||||.||||||||||||||..|||||
BPUM_1813___g 1127 AAAATGGAAAATTAAAAGAGCTTCATACGATCCAAATGGAAAAGATGAAA 1176
BSNT_03054___ 1177 AATGAGCATGGAAAATACGAGTTCCGCGAGCTGCCTGGAACGGAAAAAGT 1226
||.||.|||||.||.|..||.||.|..|||.|.||.||.||.||||||||
BPUM_1813___g 1177 AACGAACATGGGAAGTTTGAATTTCATGAGATTCCAGGGACAGAAAAAGT 1226
BSNT_03054___ 1227 ATGGCCTGCTCAGCTTGTCTTTATCGCTATCGGCTTTGAAGGCACAGAAC 1276
||||||.||||||||.||||||||.||.||.||.|||||.||.||.||||
BPUM_1813___g 1227 ATGGCCAGCTCAGCTAGTCTTTATTGCAATTGGTTTTGAGGGAACTGAAC 1276
BSNT_03054___ 1277 AGCCGCTGTTGAAACAGTTTGGTGTTGATTCTGTAAATAACAAAATCAGT 1326
||||.||..|||||||.|||||.||.|| |.|.||| |||||...||.|
BPUM_1813___g 1277 AGCCACTTGTGAAACACTTTGGCGTGGA--CAGCAAA-AACAATCGCATT 1323
BSNT_03054___ 1327 GCAGCA---TATGGGGATTATCAAACAAATATCGATGGTGTATTCGCCGC 1373
|..||| ||||||||.|||..|||||||.|.||.||||||||.||.||
BPUM_1813___g 1324 GACGCAAAGTATGGGGAATATACAACAAATGTAGAAGGTGTATTTGCAGC 1373
BSNT_03054___ 1374 AGGGGATGCAAGAAGAGGCCAAAGCTTAATCGTATGGGCGATTAATGAAG 1423
.||.|||||||||.|.||.||||||||.||.||.|||||.||||||||||
BPUM_1813___g 1374 GGGAGATGCAAGACGCGGGCAAAGCTTGATTGTCTGGGCAATTAATGAAG 1423
BSNT_03054___ 1424 GCCGTGAAGTGGCGCGTGAAGTGGATCGATATTTGATGGGGAGTTCAGTT 1473
||.|..|||||||||.|||.||.||.||.|||||.|||||||||||.|||
BPUM_1813___g 1424 GCAGACAAGTGGCGCATGAGGTAGACCGGTATTTAATGGGGAGTTCGGTT 1473
BSNT_03054___ 1474 CTTCCGTAA--- 1482
||.||..||
BPUM_1813___g 1474 CTGCCAAAATAG 1485
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