Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00580 and BPUM_1810

See DNA alignment / Visit BSNT_00580 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:23
# Commandline: needle
#    -asequence pep-align/BSNT_00580___nasE.1.24716.seq
#    -bsequence pep-align/BPUM_1810___nasE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00580___nasE-BPUM_1810___nasE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00580___nasE-BPUM_1810___nasE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00580___nasE
# 2: BPUM_1810___nasE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      66/108 (61.1%)
# Similarity:    77/108 (71.3%)
# Gaps:           3/108 ( 2.8%)
# Score: 351.0
# 
#
#=======================================

BSNT_00580___      1 MVNKDVTKVCIGKIEELPEQLGKTVYIEDKELAVFKLSDGSIRAIENRCP     50
                      :...|.||.||.:.:.|.||||||.....|||||:.|....:|||||||
BPUM_1810___n      1 -MTVSVVKVHIGTLSDFPMQLGKTVEAGTLELAVFQTSQQQFKAIENRCP     49

BSNT_00580___     51 HKGGVLAEGIVSGEYVFCPMHDWKISLEDGIVQEPDHGCVKTYETLIEGE    100
                     |||||||||:|||:|||||||||||.|..|.||.||.|||||||||:||.
BPUM_1810___n     50 HKGGVLAEGMVSGDYVFCPMHDWKIDLSSGNVQAPDDGCVKTYETLVEGN     99

BSNT_00580___    101 HVYLVY--    106
                     .|:::.  
BPUM_1810___n    100 EVFVLLPS    107


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