Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01222 and BPUM_1809

See DNA alignment / Visit BSNT_01222 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence pep-align/BSNT_01222___yetF.1.24716.seq
#    -bsequence pep-align/BPUM_1809___yetF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01222___yetF-BPUM_1809___yetF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01222___yetF-BPUM_1809___yetF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01222___yetF
# 2: BPUM_1809___yetF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     123/244 (50.4%)
# Similarity:   171/244 (70.1%)
# Gaps:          13/244 ( 5.3%)
# Score: 664.0
# 
#
#=======================================

BSNT_01222___      1 ------------MGNYLSVAVELVCGLGILFIILKLLGKTQFSQITPFDF     38
                                 ...::|:.:||..|...||.|.||||||||:|||||||
BPUM_1809___y      1 MLYVNRARKEGIFVPFISILLELFIGFFALFFITKLLGKTQFAQITPFDF     50

BSNT_01222___     39 ISALILGELVGNAVYDHEIKIKEIIFASLLWGVLIYIIEFITQKMKSSRK     88
                     ||||||||:||||::|.|:||:.|:||..:||:|||.:|:.:|:.|..|.
BPUM_1809___y     51 ISALILGEMVGNAIFDPEVKIQHILFAVAVWGILIYTVEWFSQRFKGIRA    100

BSNT_01222___     89 FLEGEPNIVIRKGELQYKVLKKNKMDINQLQSLLRQAGSFSIQEVEYAIL    138
                     ||||.|.:||.:|::.|..||||.:|:||||:|:|..|.|::.|:|||||
BPUM_1809___y    101 FLEGRPTLVIDQGKIHYNRLKKNMLDLNQLQTLIRAKGHFALNEIEYAIL    150

BSNT_01222___    139 ETNGMVSVLPKSDFDKPTNKDLQIPSKSVSLPITLIIDGEIVRDNLKEAG    188
                     ||:|.||||||..:...|.:|:.:..|.|.||.|.||||||::|:|:|||
BPUM_1809___y    151 ETDGSVSVLPKMKYATATAEDVNVKGKEVKLPRTFIIDGEILKDDLQEAG    200

BSNT_01222___    189 VDEQWLKQELKKKNIDKTEDVLFAEWHKNKPLYTVTYEQSRST-    231
                     .||.||.::||:::|....||||.||.:|:.:|.:.||:|:.. 
BPUM_1809___y    201 FDETWLSEQLKRQHISSYRDVLFCEWIENEGIYAMKYEKSKKHS    244


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