Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03011 and BPUM_1800

See DNA alignment / Visit BSNT_03011 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence pep-align/BSNT_03011___yngC.1.24716.seq
#    -bsequence pep-align/BPUM_1800.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03011___yngC-BPUM_1800.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03011___yngC-BPUM_1800.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03011___yngC
# 2: BPUM_1800
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity:     146/200 (73.0%)
# Similarity:   172/200 (86.0%)
# Gaps:           2/200 ( 1.0%)
# Score: 797.0
# 
#
#=======================================

BSNT_03011___      1 MGSLISEILTWLTNMGYAGIAIGLMIEIIPSEIVLAYGGYMVSEGTIGFI     50
                     ||:..:|||||||::||.|:|:|||||||||||||||||||||.|||||:
BPUM_1800          1 MGTFFNEILTWLTSLGYVGVALGLMIEIIPSEIVLAYGGYMVSTGTIGFV     50

BSNT_03011___     51 GAIIAGVIGGTIAQIFIYWIGRYGGRPFLDKYGKYLLIKKHHIDMSENWF    100
                     ||:||||||||:||.||||||.|||||||.||||||.|.:|||..:|.||
BPUM_1800         51 GAVIAGVIGGTLAQCFIYWIGLYGGRPFLTKYGKYLFIHEHHIATAERWF    100

BSNT_03011___    101 QKYGAGVVFSARFIPVVRHAISIPAGIARMPFLKFVVLTVLAIIPWSILF    150
                     .:||.||||:||||||||||||||||||:|||||||:||.||.|||||||
BPUM_1800        101 DRYGTGVVFTARFIPVVRHAISIPAGIAKMPFLKFVLLTGLAAIPWSILF    150

BSNT_03011___    151 VYLGIQLGSQWDDVENIAGTYTTPIMILAVVVIALYFVIKKRTAIFKR--    198
                     :|||:|||::||.::::|..||||||.:|:|:|.|||||||.....||  
BPUM_1800        151 IYLGMQLGTKWDHIQSVAHAYTTPIMAIAIVLIVLYFVIKKIRTNRKRTI    200


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