Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04189 and BPUM_1793
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:43
# Commandline: needle
# -asequence pep-align/BSNT_04189___ysfD.1.24716.seq
# -bsequence pep-align/BPUM_1793___glcF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04189___ysfD-BPUM_1793___glcF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04189___ysfD-BPUM_1793___glcF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04189___ysfD
# 2: BPUM_1793___glcF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 277/450 (61.6%)
# Similarity: 336/450 (74.7%)
# Gaps: 9/450 ( 2.0%)
# Score: 1447.0
#
#
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BSNT_04189___ 1 MTTEKEMKQIQDKFKERMDEGELLNCMRCGFCLPSCPTYIESGFHETHSP 50
|.:.|: .::|..|:::|||.||||||||||||||||||||||..|.|||
BPUM_1793___g 1 MNSSKQ-TEMQQTFQQQMDEKELLNCMRCGFCLPSCPTYIESGQQEAHSP 49
BSNT_04189___ 51 RGRIALMKAVADGMIEPDEDVERSLSLCLGCRACEPVCPSGVKYGQLLEE 100
||||||||||.||:||||:|||.||:|||||||||||||||||||:|||:
BPUM_1793___g 50 RGRIALMKAVRDGVIEPDKDVEHSLNLCLGCRACEPVCPSGVKYGRLLED 99
BSNT_04189___ 101 ARDIIHQNKKHSLGARVMRKAAFHELFPHQNRMRSAVSLIGLYQRSGLQT 150
|||||.|:||.||..:.:|:..|..|||.|:|||.|..|:..||.|||||
BPUM_1793___g 100 ARDIIQQHKKQSLPVKFVRRVVFKGLFPSQSRMRQAAGLLRFYQTSGLQT 149
BSNT_04189___ 151 AVRKTGMLRVLPEHLRTMEAVLPDVPKSKDMKHRPRFLPSIGPMKKRVAF 200
|.||:|||:|||.||:.||..||.||:.: |.|.....:||..:|||||
BPUM_1793___g 150 AARKSGMLKVLPPHLQLMEQALPKVPRQQ--KSRALEFKAIGTTRKRVAF 197
BSNT_04189___ 201 FSGCLMDTMFLPTNNATLKLLQLAGCDIVIPPEQACCGALHGHSGEKNTG 250
|:||||||:|..||.||::||||||||:|:||.|.||||||||||||...
BPUM_1793___g 198 FTGCLMDTVFSSTNEATIQLLQLAGCDVVVPPVQTCCGALHGHSGEKEQA 247
BSNT_04189___ 251 KELAKQNIAAFEALDVDAVITNAGGCGAFLTEYNHLLKDDPEWSERAAAF 300
|:||::||.|||.::.||::.|||||||||::|:|||||:|.:.:|..||
BPUM_1793___g 248 KQLARRNIEAFENIEADAIVMNAGGCGAFLSDYDHLLKDEPGFQKRGEAF 297
BSNT_04189___ 301 VQKLKDFSSVLVELDFHQMDLALETPQVVTYQDSCHLRNVMHTSLAPRQL 350
.||:.|.|.:|||:.||:........||:||||||||||.|....|||.|
BPUM_1793___g 298 SQKITDISDILVEMAFHRRTPLALPEQVITYQDSCHLRNGMGVQQAPRVL 347
BSNT_04189___ 351 LKSIKGAEFKEMEKADSCCGSAGIYNIVEAEMSMRILDSKMAAVKATEAI 400
:|:|:|..||||:.||.||||||||||:...|||:|||.||.....|.|.
BPUM_1793___g 348 MKAIQGVSFKEMKDADRCCGSAGIYNILLPTMSMQILDHKMIEASQTAAA 397
BSNT_04189___ 401 LIVTANPGCLLQMKLGIEREGLSGKVRAVHLADLLLEAA--GHKPS---- 444
.|||:||||.|||..||:|.|.|..:|||||.|.||||. |.:.|
BPUM_1793___g 398 AIVTSNPGCQLQMAAGIKRSGQSPNMRAVHLVDFLLEAVHYGKEASSSSS 447
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