Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04187 and BPUM_1791
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:42
# Commandline: needle
# -asequence pep-align/BSNT_04187___ysfB.1.24716.seq
# -bsequence pep-align/BPUM_1791.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04187___ysfB-BPUM_1791.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04187___ysfB-BPUM_1791.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04187___ysfB
# 2: BPUM_1791
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 380
# Identity: 148/380 (38.9%)
# Similarity: 219/380 (57.6%)
# Gaps: 18/380 ( 4.7%)
# Score: 687.5
#
#
#=======================================
BSNT_04187___ 1 MFLQPLLAKKIIAEVKKMYEREVIIVNTDGLIMAGTNDERVGQFHEGALI 50
..||:||:.||||:...|:||..|:|.|:|.|:..|:|||||||.:
BPUM_1791 1 ----MTLAEKIVDEVKKVLTEEIIIAQTNGTIIAATDPARIGQFHEGAYL 46
BSNT_04187___ 51 CAKERRSVIITKEDETRLKGVKAGINLPVFFDHDVIAVFGLTGEPAEIQP 100
.:.|.:..|:||:||.|:||||||||||::|..:||.|.|:||.|..:.|
BPUM_1791 47 TSFEGQKRILTKDDEQRMKGVKAGINLPIYFKQEVIGVIGMTGNPIHVSP 96
BSNT_04187___ 101 FGELLRKMTELFIKESRHLEQSQWRERMLESFMIDWLQLKEWSPSFLEKA 150
|||:|||||||.|:|.....:::..||.||:|:.|||.|.|.:....|||
BPUM_1791 97 FGEILRKMTELLIQEHEFFLETETDERQLEAFVFDWLHLPETAIDLTEKA 146
BSNT_04187___ 151 QLLGVDLSSRRQMILIQGYEWS--PHDIEQMARSWKSSYPADLFIRWGNE 198
..|.:|::.:|.::||..::.| ..|..:..:........::.:|||:.
BPUM_1791 147 ARLQLDVNMQRVVVLIDCHDESFMKQDQYKKVKEMLHLTHQEMIVRWGHA 196
BSNT_04187___ 199 RILINHEVPQHEQRDRLLRKILHICSFANTASSQYTAAGAGRAVASSSLT 248
|.|:..:...:: ||.|.:::.||.:.....|:.....|||:..|...:.
BPUM_1791 197 RFLLMLQTSAND-RDTLQQRLFHIHAALTARSTSKVLIGAGKPAAGQMMK 245
BSNT_04187___ 249 DSYEQAEKALAVSLKRKTPI-FEEDLKLDMCLTEISPGTRNEFPQRVLGE 297
.|:.||.:||.:: ...||| |:|||.|::.:.|:|..|:..|..|.:..
BPUM_1791 246 QSFHQAFRALKMA-NADTPIVFDEDLTLELFIEEVSQETKEVFLDRTIVP 294
BSNT_04187___ 298 ALEHQELMNTLRTFFHHDLSLKQTAEDMHIHINTLRYRLAKAEQLTGLRF 347
.|.:.||:.|||.....|.|||.|||.||:|||||.|||.:.:.||.|..
BPUM_1791 295 LLPYPELVKTLRVLMTSDCSLKYTAEAMHVHINTLHYRLKRIQDLTTLDP 344
BSNT_04187___ 348 DRTEDIVTMYVALYFLDQDTK--------- 368
.|.:|.:..|:||..||....
BPUM_1791 345 KRMQDAMLFYLALMLLDHHPNNRSKQPDIL 374
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