Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03024 and BPUM_1787
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence pep-align/BSNT_03024___yngK.1.24716.seq
# -bsequence pep-align/BPUM_1787.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03024___yngK-BPUM_1787.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03024___yngK-BPUM_1787.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03024___yngK
# 2: BPUM_1787
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 512
# Identity: 334/512 (65.2%)
# Similarity: 379/512 (74.0%)
# Gaps: 42/512 ( 8.2%)
# Score: 1815.0
#
#
#=======================================
BSNT_03024___ 1 MKVCQKSIVRFLVSLIIGTFVISVPFMANAQSDRELRAVWIASVLNIDWP 50
:||||||||.|:|||
BPUM_1787 1 -----------------------------------MRAVWIASVYNLDWP 15
BSNT_03024___ 51 SKKGLSVKEQKQEYIKLLDDVQKMGMNAVIVQIKPTADAFYPSAYGPWSE 100
|||||.|||||:|||.|||:::.|.|||||:||||||||||||.||||||
BPUM_1787 16 SKKGLPVKEQKEEYIHLLDEIKAMNMNAVIMQIKPTADAFYPSEYGPWSE 65
BSNT_03024___ 101 YLTGVQGKDPGYDPLAFMIEETHKRNLEFHAWFNPYRITMNHTDLNKLSE 150
||||.||||||||||.|||||.|||.|||||||||||||||||||::||.
BPUM_1787 66 YLTGTQGKDPGYDPLDFMIEEAHKRGLEFHAWFNPYRITMNHTDLSRLSA 115
BSNT_03024___ 151 SHPARKHPDWVAAYGNQLYYHPGIPETRDFIVKGIEEVVKHYDIDAVHMD 200
.|||:|||||..||||||||:||||:.::|||.||.||||:||:||||||
BPUM_1787 116 DHPAKKHPDWTIAYGNQLYYNPGIPKAQEFIVGGIAEVVKNYDVDAVHMD 165
BSNT_03024___ 201 DYFYPYKIAGQEFPDQAQYEQYGKGAFSNIDDWRRDNVNQLVKQINQTIK 250
|||||.||||..||||..||.|||.||::|:|||||||||||||||.|:|
BPUM_1787 166 DYFYPNKIAGVPFPDQKTYETYGKKAFTHIEDWRRDNVNQLVKQINDTVK 215
BSNT_03024___ 251 AEKPYVKFGISPFGVWRNAADDPTGSNTKAGVRNYDDLYADTRHWIQEGD 300
..||||||||||||||||..||||||||.||:.||||||||||.|||:.|
BPUM_1787 216 KVKPYVKFGISPFGVWRNIKDDPTGSNTTAGMTNYDDLYADTREWIQQHD 265
BSNT_03024___ 301 IDYIAPQIYWSIGFNAAAYDVLADWWSNEVKNRPVHLYIGQAAYKINNNF 350
|||:.|||||||||.|||||||..|||||||..|||||||||.||||.|.
BPUM_1787 266 IDYVTPQIYWSIGFQAAAYDVLTKWWSNEVKGEPVHLYIGQATYKINQNS 315
BSNT_03024___ 351 DPPWSDPEEYVRQITLNRQLELVKGSMHFSLKDLNKNPLGIKDRLIADLY 400
||.|||||||.|||.||||..||:|||||||||:|:|||.:|:|||.|.|
BPUM_1787 316 DPAWSDPEEYFRQIQLNRQSPLVQGSMHFSLKDINRNPLNVKNRLIEDAY 365
BSNT_03024___ 401 SKPALVPQMPWLDNTAPKKPKLTKVTEDKNGNLLQIKDHPSNQKTKETA- 449
.||||:|:||||...|||||.:..:.:..:|..||||:.| :.||
BPUM_1787 366 RKPALIPEMPWLHLKAPKKPIIQSIKKTADGTALQIKNDP-----RSTAS 410
BSNT_03024___ 450 YYAIYRAEGKKQNTLLATQRK-THEQQTFLDNTADPNKKYTYYVTSADRL 498
|||:||...|....||.|.:| |....:..|.:...||..||.||:.:||
BPUM_1787 411 YYAVYRLTTKGTYELLQTVKKETGTLTSVKDLSVHQNKSDTYKVTALNRL 460
BSNT_03024___ 499 HNESKASKRTTK 510
|:|||.|.:..:
BPUM_1787 461 HHESKPSTKRVR 472
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