Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03016 and BPUM_1782

See DNA alignment / Visit BSNT_03016 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence pep-align/BSNT_03016___yngG.1.24716.seq
#    -bsequence pep-align/BPUM_1782___yngG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03016___yngG-BPUM_1782___yngG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03016___yngG-BPUM_1782___yngG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03016___yngG
# 2: BPUM_1782___yngG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     169/302 (56.0%)
# Similarity:   228/302 (75.5%)
# Gaps:           3/302 ( 1.0%)
# Score: 931.0
# 
#
#=======================================

BSNT_03016___      1 MSYPKKVKIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSF     50
                     |:.||:|.|:|||||||||||..|:.|.:|..||..|:...|.|||:|||
BPUM_1782___y      1 MALPKRVLIREVGPRDGLQNESTWLDTSEKQRWIELLTAARLPYIEVTSF     50

BSNT_03016___     51 VHPKWIPALRDAIDVAKGIDRLKGVTYAALVPNQRGLENALEGGINEACV    100
                     |||||:|||:||.::|:.:.:...:|||||:||::||.:..|..::...:
BPUM_1782___y     51 VHPKWVPALKDAKELAQSLHKKGDITYAALIPNEKGLAHFFEANLDTGAM    100

BSNT_03016___    101 FMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPY    150
                     |:|:|||||:||:|:|..|:|.::||:..|.:.|...||||:||||||||
BPUM_1782___y    101 FISSSETHNKKNMNQSIQETLPVIKQMTADLKAAGKHTRAYISTVFGCPY    150

BSNT_03016___    151 EKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFP    200
                     |..||::||:||:|.|..:||.|:|||||||.|:|.|||..|:.||.|||
BPUM_1782___y    151 EHQVPMDQVLRLTEMLLSYGIDEISLGDTIGEAHPLQVERRLDILLERFP    200

BSNT_03016___    201 ANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPYAPGSSGNA    250
                     |::||||||||:|..|||:.|||:.|||:||.|:|||||||||||||||.
BPUM_1782___y    201 ADKIALHFHDTKGMGLANIYTALKAGITIFDASSGGLGGCPYAPGSSGNV    250

BSNT_03016___    251 ATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQVFKSS-    299
                     ||||:|:||:::.|.||:....|:.||:|||.|:.:.|||..|:.|.|. 
BPUM_1782___y    251 ATEDVVHMLQKLGIDTNINFPALIKAAEWIETKVDRTLPSHCLRAFHSHT    300

BSNT_03016___    299 --    299
                       
BPUM_1782___y    301 TS    302


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