Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03015 and BPUM_1781

See DNA alignment / Visit BSNT_03015 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence pep-align/BSNT_03015___yngF.1.24716.seq
#    -bsequence pep-align/BPUM_1781___yngF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03015___yngF-BPUM_1781___yngF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03015___yngF-BPUM_1781___yngF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03015___yngF
# 2: BPUM_1781___yngF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     151/260 (58.1%)
# Similarity:   189/260 (72.7%)
# Gaps:           0/260 ( 0.0%)
# Score: 735.0
# 
#
#=======================================

BSNT_03015___      1 MGDSILFTVKNEHMALITFNRPQAANALSAEMLRNLQMILQEIEFNSNIR     50
                     |...:.||:::|.:.:||.|||:.||||||.||..:..::|||:.:.:||
BPUM_1781___y      1 MTSLVNFTIQDEQIGIITLNRPEQANALSAAMLEEINQLIQEIKHDESIR     50

BSNT_03015___     51 CVILTGTGEKAFCAGADLKERIKLKEDQVLESVSLIQRTAALLDALPQPV    100
                     |::|||.|...||||||||||..:.|::..|:|..||:|...:::||.||
BPUM_1781___y     51 CLLLTGAGSNVFCAGADLKERRLMTEEEAKEAVLSIQQTFTEIESLPVPV    100

BSNT_03015___    101 IAAINGSALGGGLELALACDLRIAAESAVLGLPETGLAIIPGAGGTQRLP    150
                     ||.|||.|||||||||||||:|||...|.|.|||||||||||||||||||
BPUM_1781___y    101 IAVINGHALGGGLELALACDIRIARAGARLALPETGLAIIPGAGGTQRLP    150

BSNT_03015___    151 RLIGRGKAKEFIYTGRRVTAHEAKEIGLVEHVTAPCDLMPKAEELAAAIS    200
                     ||:|.|||||.|:||..:.|.||.:||||||::....||..|..||..||
BPUM_1781___y    151 RLVGLGKAKEIIFTGASLQAEEAIQIGLVEHLSLADSLMNDAISLAKQIS    200

BSNT_03015___    201 ANGPIAVRQAKFAINKGLETDLATGLAIEQKAYEQTIPTKDRREGLQAFQ    250
                     .|||||:::||.||...|:.||.|||..|.:||.:.|.|:||||||||||
BPUM_1781___y    201 KNGPIALKEAKRAIQMSLDHDLRTGLMKEYEAYLRLIDTEDRREGLQAFQ    250

BSNT_03015___    251 EKRRAVYKGI    260
                     |||...|:|.
BPUM_1781___y    251 EKRAPHYRGN    260


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