Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04987 and BPUM_1778

See DNA alignment / Visit BSNT_04987 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:43
# Commandline: needle
#    -asequence pep-align/BSNT_04987___yvgQ.1.24716.seq
#    -bsequence pep-align/BPUM_1778___cysI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04987___yvgQ-BPUM_1778___cysI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04987___yvgQ-BPUM_1778___cysI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04987___yvgQ
# 2: BPUM_1778___cysI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 572
# Identity:     471/572 (82.3%)
# Similarity:   530/572 (92.7%)
# Gaps:           1/572 ( 0.2%)
# Score: 2570.0
# 
#
#=======================================

BSNT_04987___      1 MVTKILKAPDGSPSDVERIKKESDYLRGTLKEVMLDRISAGIPDDDNRLM     50
                     ||...|.||:|.|||||.||::||||||||||||||.|||||||||||||
BPUM_1778___c      1 MVKTALTAPEGPPSDVEEIKEKSDYLRGTLKEVMLDPISAGIPDDDNRLM     50

BSNT_04987___     51 KHHGSYLQDDRDLRNERQKQKLEPAYQFMLRVRMPGGVSTPEQWLVMDDL    100
                     |||||||||||||||||||||||||||||||||:|||::|.:||||||:|
BPUM_1778___c     51 KHHGSYLQDDRDLRNERQKQKLEPAYQFMLRVRLPGGIATSKQWLVMDEL    100

BSNT_04987___    101 SQKYGNGTLKLTTRETFQMHGILKWNMKKTIQTIHSALLDTIAACGDVNR    150
                     :.||||||||||||||||:|||||||||||||.|||.:||||||||||||
BPUM_1778___c    101 AHKYGNGTLKLTTRETFQLHGILKWNMKKTIQDIHSTMLDTIAACGDVNR    150

BSNT_04987___    151 NVMCASNPYQSEIHSEVYEWSKKLSDDLLPRTRAYHEIWLDEERVAGTPE    200
                     ||||.|||||||:|.:|||.:|||||||||:||||||||||||:||.||:
BPUM_1778___c    151 NVMCTSNPYQSEVHHDVYELAKKLSDDLLPQTRAYHEIWLDEEKVAATPD    200

BSNT_04987___    201 EEVEPMYGPLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIVEDGKLIGFN    250
                     .||||||||||||||||||:||||:|||||||||||||||:|:.:|||||
BPUM_1778___c    201 TEVEPMYGPLYLPRKFKIGVAVPPANDIDVFSQDLGFIAIIENEQLIGFN    250

BSNT_04987___    251 VAIGGGMGMTHGDTATYPQLAKVIGFCRPEQMYDVAEKTITIQRDYGNRS    300
                     |||||||||||||||||||||||||||.|||:.::|::.|||||||||||
BPUM_1778___c    251 VAIGGGMGMTHGDTATYPQLAKVIGFCTPEQVVEIAKQVITIQRDYGNRS    300

BSNT_04987___    301 VRKNARFKYTVDRLGLENVKEELENRLGWSLEEAKPYHFDHNGDRYGWVE    350
                     ||||||||||||||||||||||||.|||::|.||:.|||||||||||||:
BPUM_1778___c    301 VRKNARFKYTVDRLGLENVKEELEGRLGFALLEARDYHFDHNGDRYGWVK    350

BSNT_04987___    351 GIEDKWHFTLFVEGGRITDYDDYKLMTGLREIAKVHTGEFRLTANQNLMI    400
                     ||..:||:|:|||||||.|||||.||||:|||||:|:|:|||||||||:|
BPUM_1778___c    351 GINGRWHYTMFVEGGRIIDYDDYPLMTGIREIAKIHSGDFRLTANQNLII    400

BSNT_04987___    401 ANVSSDKKEEISALIEQYGLTDGKHYSALRRSSMACVALPTCGLAMAEAE    450
                     .||:|.||::|..||:::||:||:.:||||||||||||||||||||||||
BPUM_1778___c    401 GNVTSHKKKQIEQLIQEFGLSDGQQHSALRRSSMACVALPTCGLAMAEAE    450

BSNT_04987___    451 RYLPTLLDKIEEIIDENGLRDQEITIRMTGCPNGCARHALGEIGFIGKAP    500
                     ||||.|:||||||::||||.|:||||||||||||||||||||||||||:|
BPUM_1778___c    451 RYLPRLIDKIEEIVEENGLSDKEITIRMTGCPNGCARHALGEIGFIGKSP    500

BSNT_04987___    501 GKYNMYLGAAFDGSRLSKMYRENIGEADILSELRILLSRYAKEREEGEHF    550
                     ||||||||||||||||||:||||:||.:||:||..||.||||||||.|||
BPUM_1778___c    501 GKYNMYLGAAFDGSRLSKLYRENVGEEEILNELGSLLPRYAKEREEKEHF    550

BSNT_04987___    551 GDFVIRAGIIKATTDGTNFHD-    571
                     ||||:||||:|.||||||||. 
BPUM_1778___c    551 GDFVVRAGIVKETTDGTNFHVQ    572


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