Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04879 and BPUM_1766

See DNA alignment / Visit BSNT_04879 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_04879___yusP.1.24716.seq
#    -bsequence pep-align/BPUM_1766.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04879___yusP-BPUM_1766.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04879___yusP-BPUM_1766.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04879___yusP
# 2: BPUM_1766
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 572
# Identity:     204/572 (35.7%)
# Similarity:   309/572 (54.0%)
# Gaps:          73/572 (12.8%)
# Score: 947.5
# 
#
#=======================================

BSNT_04879___      1 ------------------------MKMSKEGKQSKRTLLITGLIIAMFFS     26
                                             |.....||.|.|.::| ||::.:|.:
BPUM_1766          1 MFSSFIFKLIIAKIRRERKQGVNEMNHVDNGKASTRFVVI-GLLLGIFMA     49

BSNT_04879___     27 ALDGTIVGTAMPKIVGDLGGLSMMTWLTTAYLLTSTTIVPIAGKLADLLG     76
                     |:|.|||.|||..||.|||......|:|.:|::.....:||.|||:|:.|
BPUM_1766         50 AMDNTIVATAMGSIVADLGSFDKFAWVTASYMVAVMAGMPIYGKLSDMYG     99

BSNT_04879___     77 RRIVYVSGLIIFMAASALCGMANNMTELIIFRGLQGIGGGIMMPMAMIVI    126
                     |:..::.|||.|:..|||||:|..|.:|||:|.:||:|||.::|:|..:|
BPUM_1766        100 RKRFFLFGLIFFLIGSALCGIAQTMDQLIIYRAIQGLGGGALLPIAFTII    149

BSNT_04879___    127 GDLFTGKQRAKFQGVFGAIYGLASVIGPQIGGWIVDSLNWKWVFYINLPV    176
                     .|:|..::|.|..|:|||::||:||:||.:|..|.||:.|.||||||:|:
BPUM_1766        150 FDIFPPEKRGKMSGMFGAVFGLSSVLGPLLGAIITDSIGWHWVFYINVPI    199

BSNT_04879___    177 GIIAVIFIAR----GLQGRQQTGPINFDIAGIFTMIVGVVSLLLALSFGG    222
                     ||::|..|||    .|:.|:|    ..|.:|..|::|.||||:.||..||
BPUM_1766        200 GIVSVFLIARYYQESLEHRKQ----KIDWSGAITLVVAVVSLMFALELGG    245

BSNT_04879___    223 KDYAWDSWQILGLFALALIGIVSFIIVESKAKEPILPMYLFKNRTFTFLN    272
                     |.|||||.|||.|||:.|:....|.|||.||:|||:..::||||.|....
BPUM_1766        246 KSYAWDSVQILTLFAVFLVFGTIFFIVERKAEEPIISFWMFKNRLFATSQ    295

BSNT_04879___    273 LIGFFMSIGMFGAITFVPFFMQGIVGVSASESGTIMTPMMISMIITSIIG    322
                     ::.|...........|:|.|:|.:.|.||:.:|.|:|||||..:|.|:||
BPUM_1766        296 ILAFLYGGTFIILAVFIPIFVQAVYGESATSAGFILTPMMIGSVIGSMIG    345

BSNT_04879___    323 GQLVYKIGIKPQIIAGMLVMAGGFLLLTTLDLDTSKLVATSFMAIIGLGM    372
                     |.:..|:..:..:...::....|.|||..:..||::|..|.||.|.|.|:
BPUM_1766        346 GTMQTKVPFRRLMAISVISFFAGMLLLANMSPDTARLWLTIFMMISGFGV    395

BSNT_04879___    373 GLVMPILTLALQESFSKEELGVVTSSSQFFRSIGGTFGITMLGAVMNARS    422
                     |....:|..|.....:....|...|::.|.||:|.|.|:|:.|.:..   
BPUM_1766        396 GFSFSLLPSASMNDLAPRYRGSANSTNSFMRSLGMTLGVTIFGTIQT---    442

BSNT_04879___    423 GNLLTDKLVPYLDSLPAQASSFAAQLKGMIDTNPQ-GLLQSLFSPDAVKQ    471
                      |:|:::|          |.:|:    ||...:.| |..|::|...|..|
BPUM_1766        443 -NVLSNRL----------ADAFS----GMKGASSQIGDPQAIFQEGARSQ    477

BSNT_04879___    472 IPAAFSSHIVPILKTSLMDSLHSVFYTGLIFIAVGAVFTLFL--KPIKLS    519
                     ||:...:.::    .::..|:..||...|..||:.|:..||:  ..::.|
BPUM_1766        478 IPSDILNKVI----DAMSQSITYVFLIALFPIALAAITVLFMGNARVRTS    523

BSNT_04879___    520 NKKTEDQQEKEKAAKAVESPSH    541
                     |:..|::               
BPUM_1766        524 NEMKENE---------------    530


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