Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05521 and BPUM_1764
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:08
# Commandline: needle
# -asequence pep-align/BSNT_05521.1.24716.seq
# -bsequence pep-align/BPUM_1764.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05521-BPUM_1764.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05521-BPUM_1764.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05521
# 2: BPUM_1764
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 593
# Identity: 199/593 (33.6%)
# Similarity: 289/593 (48.7%)
# Gaps: 151/593 (25.5%)
# Score: 895.5
#
#
#=======================================
BSNT_05521 1 MSKVFESKSLIEEAKSRKKQYETLEEQLNTLKKAFQGVADLGDNFKGKGA 50
..:|.|.|:.|.||:..||||.||||:|||:|.||||
BPUM_1764 1 -------------MDTRSKHYQELREQMVDLKKALQGVANLGDDFTGKGA 37
BSNT_05521 51 DNIKDFFQGQAEIVDSWLTLVSAQIAFLNGISGDIKDQEL-NDSYVETSF 99
||||.|::..|..||.:::.:..|.||..|:||.:.|... .|::||..|
BPUM_1764 38 DNIKSFYKELAGNVDMFISFIDKQKAFHEGVSGTLDDTNFGGDTFVEEHF 87
BSNT_05521 100 LDHELPNGDLKASEIVSAHKEEIDSILSGISDIIDLDMYTLDDYADKMGD 149
||:.:..|...|..||...|:.:.:|...|.|::.|:::....:.:|:.|
BPUM_1764 88 LDNAVHMGIKNAKSIVKDQKKALKTIFQDIDDLLSLEVFDSQTFDEKIAD 137
BSNT_05521 150 AQKIRRDTITAVDKLDESLTTEYQNLESLDNAVLTKYSVLMQATSNGKSA 199
|:..|:.|:..:.:||::|..||...|:...|.:..|:.:|.||::||:.
BPUM_1764 138 AEDERKKTVKDLRELDQNLKDEYALSETEQQATMALYAEMMNATNDGKAI 187
BSNT_05521 200 SPMYYDKKAFHSNEVYKSVIEVENQGTTYIDAKTQQAEARRLQEKAEEEA 249
|||.:||||:.::|:||:..::|.|.:.|::.|.:|.|||.:.::.|..|
BPUM_1764 188 SPMNFDKKAYQNSEIYKAKSDIEKQTSEYLNIKKEQQEAREIAKEQEALA 237
BSNT_05521 250 NKPWYEKTWDGVCNFTGEVTGYYDYKRATEGVDPVTGEKLSTAERVTAGA 299
|:|||||..|...|...|:||..|.|||..||||:|||:|:..:||.||.
BPUM_1764 238 NRPWYEKALDYGGNIVNELTGVNDAKRAATGVDPITGEELTAGQRVAAGG 287
BSNT_05521 300 MAAAGFIPVVGWAGRAFKGGKAIYKTGKAAIAAEHALDAYKTG-KSLDIL 348
|||||:||:||||||.||||||:|||.:|..||..|:|.|||. ||.|.|
BPUM_1764 288 MAAAGYIPIVGWAGRIFKGGKAVYKTTQATSAAVKAVDIYKTSQKSFDAL 337
BSNT_05521 349 KMTEMGAYGLVASNGFSEAVTGRDMFGNKVSEEKRKTGALEAALSLV--- 395
|.::.|.|||.|:||||||:|||||||||:|:|::: .::.|||.::
BPUM_1764 338 KTSQKGLYGLTATNGFSEAITGRDMFGNKISKEQQE-ASMNAALGMLLPF 386
BSNT_05521 396 GA------------------GALAKHI---DKGIPL-----ATHSK--FQ 417
|| .:|..|| |..:|. ..|:| |.
BPUM_1764 387 GAKGFRGKMGIMGREKVKYSSSLEDHIRKVDTNVPRRRGIGGAHNKDEFM 436
BSNT_05521 418 KANKTLEKVKQFKVPTNVRVYAERPVTPEGFTFGIPTVRVDVEKTAVKDL 467
|.:..:..||:......| |..|:.:|
BPUM_1764 437 KNDVNILNVKKHDALPGV----------EKITYQVP-------------- 462
BSNT_05521 468 GIVKMVVMAVVREALIVLTFLKITIK------------------------ 493
:|...|..||..|
BPUM_1764 463 -------------SLDAKTGQKIGWKAKPFDKTVYDPKLISDEDFIKRGK 499
BSNT_05521 493 ------------------------------------------- 493
BPUM_1764 500 EAVNNASSKGVLGREWEGYDGQGIKWRGYTDKDGAVTSFYPEL 542
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