Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04407 and BPUM_1753
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:57
# Commandline: needle
# -asequence pep-align/BSNT_04407___msmE.1.24716.seq
# -bsequence pep-align/BPUM_1753___msmE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04407___msmE-BPUM_1753___msmE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04407___msmE-BPUM_1753___msmE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04407___msmE
# 2: BPUM_1753___msmE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 428
# Identity: 218/428 (50.9%)
# Similarity: 298/428 (69.6%)
# Gaps: 12/428 ( 2.8%)
# Score: 1199.5
#
#
#=======================================
BSNT_04407___ 1 MKHTFVLFLSLILL--VLPGCSAEKSSADTAKKTLTIYSTMSTDSERDTF 48
|....:|..::.:| :|..|....:|....|.|||::||||...||..|
BPUM_1753___m 1 MNKKIMLLTAVFVLTILLSACGNNGTSEANGKVTLTLFSTMSNSGERKAF 50
BSNT_04407___ 49 RKLAAAFEKEHSDIHVSLHFPGNDYENMMRVRMAANDLPDLFDTHGWGKI 98
.::..||||||..:.:..:||||.||:.:||:|.|||:|||||||||.|:
BPUM_1753___m 51 EEVIRAFEKEHPHLRIDANFPGNSYEDTIRVKMGANDMPDLFDTHGWAKL 100
BSNT_04407___ 99 RYGEYTADLRDMEWTQDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRN 148
||.||.|||::|.|.:.|||:|:.|||::.|||||||:||||||:::|.|
BPUM_1753___m 101 RYSEYVADLKEMNWVKKLDPSLDQILKDQDGKVYAYPLNQAKDGVSFNAN 150
BSNT_04407___ 149 ILDRYGIAPPETMDDFIKALRTIKEKSKGSIVPFWFAGYDKSSFAQYYDQ 198
:|..|.|..|.|:|:|..||.|:||||||.:||.|..|.|.|:.||.:|:
BPUM_1753___m 151 LLKDYDIEVPRTLDEFKSALLTVKEKSKGEVVPLWIPGGDNSNIAQVFDE 200
BSNT_04407___ 199 FATPLLITDPAHNEKKQLINGTFQWNKFTCLSKILKQMQKEKLINIDAVT 248
.|||||||.|.|...|:|.||:|.|:.:|.|::.:|:::.:.|:|.|.:|
BPUM_1753___m 201 LATPLLITGPNHQYGKELENGSFDWSLYTPLAQFMKELKDQDLLNKDVLT 250
BSNT_04407___ 249 AKKSQLIELMAQNKIAFTMQGGTLGQDVAQINSNVEVGIIPTPAIHPGDD 298
||.||..|||||||||||..||:||.:..::|.:|:||.:|.|:||.||.
BPUM_1753___m 251 AKLSQAPELMAQNKIAFTFVGGSLGPEATELNPSVKVGTMPVPSIHKGDK 300
BSNT_04407___ 299 PIWIGGERYTLAAWKDSSQLKEAKEFIAFMARPANAKQMAEATSLPSGLT 348
..||||||:|:||||:|..|||||:||.|:|:|.|||::||.||..:.|.
BPUM_1753___m 301 QSWIGGERFTVAAWKNSKHLKEAKQFIDFLAKPENAKKIAEGTSSEAALK 350
BSNT_04407___ 349 NVKADIFYANDYEHYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILA 398
.|||...|:..|:.|:.||:||||||.|||:|||.|:.|.||||.|..:.
BPUM_1753___m 351 QVKAKNDYSTFYDQYEQVKIEPYFDRKYLPSGMWAVMATTGQELLAGSIT 400
BSNT_04407___ 399 PQDISQKLGREYKRLREQSETQGAENNE 426
|:.:|:|:..|||||::|
BPUM_1753___m 401 PEQLSKKMEEEYKRLKKQ---------- 418
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